mfsd6b major facilitator superfamily domain containing 6b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mfsd6bprovided by ZNC
Official Full Name: major facilitator superfamily domain containing 6bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040912-84
See related: Ensembl:ENSDARG00000054583 AllianceGenome:ZFIN:ZDB-GENE-040912-84
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:92925
Summary: Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in lateral line system and notochord. Orthologous to human MFSD6 (major facilitator superfamily domain containing 6). [provided by Alliance of Genome Resources, Apr 2022]
Annotation information: Annotation category: suggests misassembly
Orthologs: all
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Genomic context

Location:: chromosome: 9

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (41482831..41507712, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (41681044..41705925, complement)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: major facilitator superfamily domain-containing protein 6-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001328216.1 → NP_001315145.1 major facilitator superfamily domain-containing protein 6-B

Status: VALIDATED

Source sequence(s)

CR735121, EH455361

UniProtKB/Swiss-Prot

B0UYT5

UniProtKB/TrEMBL

A0A8M1P4K6

Related

ENSDARP00000120762.1, ENSDART00000135821.2

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007120.7 Reference GRCz11 Primary Assembly

Range

41482831..41507712 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001004564.1: Suppressed sequence

Description

NM_001004564.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.