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NR4A1 nuclear receptor subfamily 4 group A member 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 451913, updated on 19-Mar-2021

Summary

Official Symbol
NR4A1provided by VGNC
Official Full Name
nuclear receptor subfamily 4 group A member 1provided by VGNC
Primary source
VGNC:VGNC:5507
Locus tag
CK820_G0039616
See related
Ensembl:ENSPTRG00000004966
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See NR4A1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 12 NC_036891.1 (37042856..37065191, complement)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 12 NC_006479.4 (37782118..37804479, complement)

Chromosome 12 - NC_036891.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 7E24-like Neighboring gene autophagy related 101 Neighboring gene trafficking regulator and scaffold protein tamalin Neighboring gene U6 spliceosomal RNA Neighboring gene activin A receptor type 1B

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

General protein information

Preferred Names
nuclear receptor subfamily 4 group A member 1
Names
orphan nuclear receptor NR4A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036891.1 Reference Clint_PTRv2 Primary Assembly

    Range
    37042856..37065191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009425363.2XP_009423638.1  nuclear receptor subfamily 4 group A member 1 isoform X5

    Conserved Domains (2) summary
    cl02596
    Location:337364
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    cl11397
    Location:362576
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  2. XM_009425361.2XP_009423636.1  nuclear receptor subfamily 4 group A member 1 isoform X1

    Conserved Domains (2) summary
    cd07348
    Location:433670
    NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
    cd06969
    Location:337411
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
  3. XM_003313691.4XP_003313739.1  nuclear receptor subfamily 4 group A member 1 isoform X2

    Related
    ENSPTRP00000039485.4
    Conserved Domains (2) summary
    cd07348
    Location:415652
    NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
    cd06969
    Location:319393
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
  4. XM_003952188.4XP_003952237.1  nuclear receptor subfamily 4 group A member 1 isoform X4

    See identical proteins and their annotated locations for XP_003952237.1

    UniProtKB/TrEMBL
    H2QZT3
    Conserved Domains (2) summary
    cd07348
    Location:361598
    NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
    cd06969
    Location:265339
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
  5. XM_003313690.4XP_003313738.1  nuclear receptor subfamily 4 group A member 1 isoform X4

    See identical proteins and their annotated locations for XP_003313738.1

    UniProtKB/TrEMBL
    H2QZT3
    Conserved Domains (2) summary
    cd07348
    Location:361598
    NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
    cd06969
    Location:265339
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
  6. XM_003313689.4XP_003313737.1  nuclear receptor subfamily 4 group A member 1 isoform X4

    See identical proteins and their annotated locations for XP_003313737.1

    UniProtKB/TrEMBL
    H2QZT3
    Related
    ENSPTRP00000062138.1
    Conserved Domains (2) summary
    cd07348
    Location:361598
    NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
    cd06969
    Location:265339
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
  7. XM_009425362.3XP_009423637.1  nuclear receptor subfamily 4 group A member 1 isoform X3

    Conserved Domains (2) summary
    cd07348
    Location:365602
    NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
    cd06969
    Location:269343
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
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