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ATP6V1C1 ATPase H+ transporting V1 subunit C1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464326, updated on 29-Mar-2024

Summary

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Official Symbol
ATP6V1C1provided by VGNC
Official Full Name
ATPase H+ transporting V1 subunit C1provided by VGNC
Primary source
VGNC:VGNC:7587
Locus tag
CK820_G0002044
See related
Ensembl:ENSPTRG00000020486
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ATP6V1C1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (113276637..113324884)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (117851912..117900142)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(I) chain-like Neighboring gene antizyme inhibitor 1 Neighboring gene uncharacterized LOC134810689 Neighboring gene uncharacterized LOC129135794 Neighboring gene uncharacterized LOC112204210 Neighboring gene BAALC binder of MAP3K1 and KLF4 Neighboring gene microRNA mir-3151

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 1
Names
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    113276637..113324884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001155312.6 → XP_001155312.1  V-type proton ATPase subunit C 1

    See identical proteins and their annotated locations for XP_001155312.1

    UniProtKB/TrEMBL
    A0A2I3TNX8, A0A2J8PMR7, A0A6D2WYH4, H2RD64
    Related
    ENSPTRP00000090930.1
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_009455756.5 → XP_009454031.1  V-type proton ATPase subunit C 1

    See identical proteins and their annotated locations for XP_009454031.1

    UniProtKB/TrEMBL
    A0A2I3TNX8, A0A2J8PMR7, A0A6D2WYH4, H2RD64
    Related
    ENSPTRP00000058391.1
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
Heading Accession and Version

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