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ALG12 ALG12 alpha-1,6-mannosyltransferase [ Pan troglodytes (chimpanzee) ]

Gene ID: 470247, updated on 29-Mar-2024

Summary

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Official Symbol
ALG12provided by VGNC
Official Full Name
ALG12 alpha-1,6-mannosyltransferaseprovided by VGNC
Primary source
VGNC:VGNC:9921
Locus tag
CK820_G0049055
See related
Ensembl:ENSPTRG00000014523
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 23 NC_086016.1 (52006038..52035846, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 22 NC_072420.1 (45038383..45068186, complement)

Chromosome 23 - NC_086016.1Genomic Context describing neighboring genes Neighboring gene bromodomain containing 1 Neighboring gene uncharacterized LOC129138461 Neighboring gene zinc finger BED-type containing 4 Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene Pim-3 proto-oncogene, serine/threonine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
Names
asparagine-linked glycosylation 12 homolog (S. cerevisiae, alpha-1,6-mannosyltransferase)
asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog
XP_001140006.1
XP_009436925.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086016.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    52006038..52035846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009438650.4 → XP_009436925.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:19 → 354
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_001140006.8 → XP_001140006.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    See identical proteins and their annotated locations for XP_001140006.1

    UniProtKB/TrEMBL
    A0A2J8JBV1, A0A6D2WXD0, H2QLX4
    Related
    ENSPTRP00000025035.3
    Conserved Domains (1) summary
    cl21590
    Location:19 → 354
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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