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anxa3b annexin A3b [ Danio rerio (zebrafish) ]

Gene ID: 492336, updated on 11-Apr-2024

Summary

Official Symbol
anxa3bprovided by ZNC
Official Full Name
annexin A3bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-041114-128
See related
Ensembl:ENSDARG00000044254 AllianceGenome:ZFIN:ZDB-GENE-041114-128
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:92888
Summary
Predicted to enable calcium ion binding activity. Predicted to be active in cytoplasm. Is expressed in dorsal aorta. Orthologous to human ANXA3 (annexin A3). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See anxa3b in Genome Data Viewer
Location:
chromosome: 10
Exon count:
14
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (9247593..9269733, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (9414034..9436174, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene ANTXR cell adhesion molecule 2b Neighboring gene progestin and adipoQ receptor family member IIIb Neighboring gene cilia- and flagella-associated protein 251-like Neighboring gene glucose-6-phosphate exchanger SLC37A4-like

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC173763

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables calcium-dependent phospholipid binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 
enables phosphatidylserine binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables phospholipase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in vesicle membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007302.2NP_001007303.1  annexin A3b

    See identical proteins and their annotated locations for NP_001007303.1

    Status: VALIDATED

    Source sequence(s)
    BC085679, BC153566, DV588921
    UniProtKB/TrEMBL
    A0A286YAA9, A0A8N7XJG6, A8E5E5, F6NW78, Q5U369
    Related
    ENSDARP00000064973.2, ENSDART00000064974.3
    Conserved Domains (1) summary
    pfam00191
    Location:39103
    Annexin; Annexin

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    9247593..9269733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394770.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    35016..57156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)