C5h6orf163 similar to human chromosome 6 open reading frame 163 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: C5h6orf163provided by RGD
Official Full Name: similar to human chromosome 6 open reading frame 163provided by RGD
Primary source: RGD:1563056
See related: Ensembl:ENSRNOG00000009178 AllianceGenome:RGD:1563056
Gene type: protein coding
RefSeq status: MODEL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1563056
Summary: Orthologous to human C6orf163 (chromosome 6 open reading frame 163). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Testes (RPKM 33.8), Kidney (RPKM 1.9) and 1 other tissue See more
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	5	NC_086023.1 (54113073..54132787, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	5	NC_051340.1 (49316784..49329164, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	5	NC_005104.4 (50210303..50221560, complement)

Chromosome 5 - NC_086023.1 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

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The following sections contain reference sequences that belong to a specific genome build. Explain

XM_063288522.1 → XP_063144592.1 uncharacterized protein C6orf163 homolog isoform X2
XM_575796.7 → XP_575796.2 uncharacterized protein C6orf163 homolog isoform X1

See identical proteins and their annotated locations for XP_575796.2

UniProtKB/TrEMBL

D3ZAP6

Related

ENSRNOP00000012164.5

Conserved Domains (1) summary

TIGR02168
Location:48 → 284

SMC_prok_B; chromosome segregation protein SMC, common bacterial type
XM_006238003.5 → XP_006238065.1 uncharacterized protein C6orf163 homolog isoform X2

See identical proteins and their annotated locations for XP_006238065.1

Conserved Domains (1) summary

pfam09731
Location:23 → 128

Mitofilin; Mitochondrial inner membrane protein