anxa1d annexin A1d [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: anxa1dprovided by ZNC
Official Full Name: annexin A1dprovided by ZNC
Primary source: ZFIN:ZDB-GENE-050417-72
See related: Ensembl:ENSDARG00000098481 AllianceGenome:ZFIN:ZDB-GENE-050417-72
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:110283; CH73-348L8.3
Summary: Predicted to enable calcium ion binding activity; calcium-dependent phospholipid binding activity; and phospholipase A2 inhibitor activity. Predicted to be involved in several processes, including animal organ development; regulation of T cell activation; and regulation of cell migration. Predicted to be located in several cellular components, including basolateral plasma membrane; cilium; and lateral plasma membrane. Predicted to be active in cytoplasm; extracellular space; and plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 5

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (64994083..65004791, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (64309014..64315794, complement)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info
enables calcium-dependent phospholipid binding	IBA Inferred from Biological aspect of Ancestor more info
enables calcium-dependent phospholipid binding	IEA Inferred from Electronic Annotation more info
enables phosphatidylserine binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in cellular response to glucocorticoid stimulus	IBA Inferred from Biological aspect of Ancestor more info
involved_in phagocytosis	IBA Inferred from Biological aspect of Ancestor more info
involved_in signal transduction	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info
is_active_in vesicle membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC550268

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001017605.1 → NP_001017605.1 uncharacterized protein LOC550268

See identical proteins and their annotated locations for NP_001017605.1

Status: PREDICTED

Source sequence(s)

BC092847

UniProtKB/TrEMBL

Q568I4

Related

ENSDARP00000147401.1, ENSDART00000180023.1

Conserved Domains (1) summary

pfam00191
Location:271 → 336

Annexin; Annexin

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007116.7 Reference GRCz11 Primary Assembly

Range

64994083..65004791 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021476151.1 → XP_021331826.1 uncharacterized protein LOC550268 isoform X1

UniProtKB/TrEMBL

A0A8M9Q8L1

Related

ENSDARP00000140158.2, ENSDART00000169287.3

Conserved Domains (1) summary

pfam00191
Location:271 → 336

Annexin
XM_021476152.1 → XP_021331827.1 uncharacterized protein LOC550268 isoform X2

UniProtKB/TrEMBL

A0A8M9PK36

Conserved Domains (1) summary

pfam00191
Location:165 → 230

Annexin