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fthl31 ferritin, heavy polypeptide-like 31 [ Danio rerio (zebrafish) ]

Gene ID: 553552, updated on 27-Mar-2024

Summary

Official Symbol
fthl31provided by ZNC
Official Full Name
ferritin, heavy polypeptide-like 31provided by ZNC
Primary source
ZFIN:ZDB-GENE-050522-428
See related
Ensembl:ENSDARG00000094210 AllianceGenome:ZFIN:ZDB-GENE-050522-428
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:109934
Summary
Predicted to enable ferric iron binding activity and ferrous iron binding activity. Predicted to be involved in intracellular sequestering of iron ion. Predicted to act upstream of or within cellular iron ion homeostasis and iron ion transport. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See fthl31 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (32118670..32120354)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (31986956..31988640)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene ferritin, heavy polypeptide-like 29 Neighboring gene ferritin, heavy polypeptide-like 28 Neighboring gene uncharacterized LOC108182827 Neighboring gene ferritin, heavy polypeptide-like 30 Neighboring gene ferritin, middle subunit-like Neighboring gene ferritin, middle subunit-like

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC109934

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ferric iron binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 
enables ferrous iron binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular sequestering of iron ion IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within iron ion transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
ferritin, heavy polypeptide-like 31

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020531.1NP_001018367.1  ferritin, heavy polypeptide-like 31

    See identical proteins and their annotated locations for NP_001018367.1

    Status: PROVISIONAL

    Source sequence(s)
    BC095061
    UniProtKB/TrEMBL
    Q504E2
    Related
    ENSDARP00000055286.5, ENSDART00000055287.6
    Conserved Domains (2) summary
    cd01056
    Location:13170
    Euk_Ferritin; eukaryotic ferritins
    pfam00210
    Location:15156
    Ferritin; Ferritin-like domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    32118670..32120354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)