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micos13 mitochondrial contact site and cristae organizing system subunit 13 [ Danio rerio (zebrafish) ]

Gene ID: 558738, updated on 27-Mar-2024

Summary

Official Symbol
micos13provided by ZNC
Official Full Name
mitochondrial contact site and cristae organizing system subunit 13provided by ZNC
Primary source
ZFIN:ZDB-GENE-050309-178
See related
Ensembl:ENSDARG00000071378 AllianceGenome:ZFIN:ZDB-GENE-050309-178
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
qil1; mic13; im:7151185; si:dkey-78l4.14
Summary
Predicted to be involved in cristae formation. Predicted to be located in mitochondrial inner membrane. Predicted to be part of MICOS complex. Predicted to be active in mitochondrial crista junction. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 37. Orthologous to human MICOS13 (mitochondrial contact site and cristae organizing system subunit 13). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See micos13 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (19547476..19552803, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (19522498..19527825, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:dkey-78l4.12 Neighboring gene arginine esterase-like Neighboring gene hydroxysteroid (11-beta) dehydrogenase 1-like a Neighboring gene RGM domain family, member D

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in cristae formation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cristae formation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of MICOS complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of MICOS complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrial crista junction IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrial crista junction ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
MICOS complex subunit MIC13
Names
protein QIL1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001044873.1NP_001038338.1  MICOS complex subunit MIC13

    See identical proteins and their annotated locations for NP_001038338.1

    Status: PROVISIONAL

    Source sequence(s)
    BX936298
    UniProtKB/Swiss-Prot
    Q1LUK0, Q1LUK1
    Related
    ENSDARP00000096258.3, ENSDART00000105485.4
    Conserved Domains (1) summary
    pfam15884
    Location:9100
    QIL1; Protein QIL1

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    19547476..19552803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395102.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    260650..265948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)