nol8 nucleolar protein 8 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nol8provided by ZNC
Official Full Name: nucleolar protein 8provided by ZNC
Primary source: ZFIN:ZDB-GENE-050208-491
See related: Ensembl:ENSDARG00000044143 AllianceGenome:ZFIN:ZDB-GENE-050208-491
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: si:ch211-103f16.2
Summary: Predicted to enable RNA binding activity. Predicted to be involved in protein localization to nucleolus. Predicted to be located in nucleus. Predicted to be active in nucleolus. Orthologous to human NOL8 (nucleolar protein 8). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 22

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (10425509..10440717, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (10395805..10411033, complement)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RNA binding	IBA Inferred from Biological aspect of Ancestor more info
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in protein localization to nucleolus	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in nucleolus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: nucleolar protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001080202.1 → NP_001073671.1 nucleolar protein 8

Status: PROVISIONAL

Source sequence(s)

BX908397

UniProtKB/TrEMBL

A0A8N7UYK6, Q1LV47

Related

ENSDARP00000102804.4, ENSDART00000111962.6

Conserved Domains (2) summary

cd12226
Location:3 → 82

RRM_NOL8; RNA recognition motif in nucleolar protein 8 (NOL8) and similar proteins

pfam02455
Location:1063 → 1173

Hex_IIIa; Hexon-associated protein (IIIa)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007133.7 Reference GRCz11 Primary Assembly

Range

10425509..10440717 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005173974.4 → XP_005174031.1 nucleolar protein 8 isoform X1

UniProtKB/TrEMBL

A0A8M2BLC0

Conserved Domains (2) summary

cd12226
Location:3 → 82

RRM_NOL8; RNA recognition motif in nucleolar protein 8 (NOL8) and similar proteins

pfam02455
Location:1117 → 1227

Hex_IIIa; Hexon-associated protein (IIIa)