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TNRC18P1 trinucleotide repeat containing 18 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 644962, updated on 10-Oct-2023

Summary

Official Symbol
TNRC18P1provided by HGNC
Official Full Name
trinucleotide repeat containing 18 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:43881
See related
AllianceGenome:HGNC:43881
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See TNRC18P1 in Genome Data Viewer
Location:
4q31.21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (140641191..140643080, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (143960862..143962751, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (141562345..141564234, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncoupling protein 1 Neighboring gene RNA, 7SL, cytoplasmic 152, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:141521261-141521798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:141539361-141539964 Neighboring gene TBC1 domain family member 9 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:141564748-141565421 Neighboring gene uncharacterized LOC124900787 Neighboring gene RNY1 pseudogene 14

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_077215.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108019

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    140641191..140643080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    143960862..143962751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_006175.2: Suppressed sequence

    Description
    NG_006175.2: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.