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LOC6724920 6-phosphogluconate dehydrogenase, decarboxylating [ Drosophila simulans ]

Gene ID: 6724920, updated on 15-Sep-2023

Summary

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Gene symbol
LOC6724920
Gene description
6-phosphogluconate dehydrogenase, decarboxylating
Locus tag
Dsimw501_GD16588
See related
EnsemblRapid:LOC6724920
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
pgd; 6PGD; 6pgdh; Pgd-PB; GD16588; Dsim\Pgd; GD16588-PB
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Genomic context

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Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) X NC_052525.2 (1926762..1930072)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) X NC_052525.1 (1926759..1930073)

Chromosome X - NC_052525.2Genomic Context describing neighboring genes Neighboring gene polyhomeotic-proximal chromatin protein Neighboring gene D-2-hydroxyglutarate dehydrogenase, mitochondrial Neighboring gene protein bcn92 Neighboring gene protein wings apart-like Neighboring gene cytochrome P450 4d1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Population structure among African and derived populations of Drosophila simulans: evidence for ancient subdivision and recent admixture. Hamblin MT, et al. Genetics, 1999 Sep. PMID 10471714, Free PMC Article
  2. Molecular population genetics of the distal portion of the X chromosome in Drosophila: evidence for genetic hitchhiking of the yellow-achaete region. Begun DJ, et al. Genetics, 1991 Dec. PMID 1664405, Free PMC Article
  3. Hitchhiking under positive Darwinian selection. Fay JC, et al. Genetics, 2000 Jul. PMID 10880498, Free PMC Article
  4. Distinguishing migration from isolation using genes with intragenic recombination: detecting introgression in the Drosophila simulans species complex. Navascués M, et al. BMC Evol Biol, 2014 Apr 24. PMID 24762206, Free PMC Article
  5. Genomic effects of nucleotide substitutions in Drosophila simulans. Kern AD, et al. Genetics, 2002 Dec. PMID 12524346, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphogluconate dehydrogenase (decarboxylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-gluconate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
6-phosphogluconate dehydrogenase, decarboxylating
Names
Dsim\GD16588
Dsim\GD16588-PB
Dsim\Pgd-PB
dsim_GLEANR_16789
phosphogluconate dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052525.2 Reference Prin_Dsim_3.1

    Range
    1926762..1930072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016173312.3 → XP_016037778.1  6-phosphogluconate dehydrogenase, decarboxylating

    UniProtKB/Swiss-Prot
    P41573
    Related
    XP_016037778.1, XM_016173312.3
    Conserved Domains (3) summary
    PRK09287
    Location:15 → 471
    PRK09287; 6-phosphogluconate dehydrogenase; Validated
    pfam00393
    Location:180 → 467
    6PGD; 6-phosphogluconate dehydrogenase, C-terminal domain
    pfam03446
    Location:4 → 176
    NAD_binding_2; NAD binding domain of 6-phosphogluconate dehydrogenase
Nucleotide Protein Strain
Heading Accession and Version

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