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TRAF5 TNF receptor associated factor 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711879, updated on 5-Mar-2024

Summary

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Official Symbol
TRAF5provided by VGNC
Official Full Name
TNF receptor associated factor 5provided by VGNC
Primary source
VGNC:VGNC:78644
See related
Ensembl:ENSMMUG00000031427
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TRAF5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (68814132..68861313)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (155153509..155202674, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S25 pseudogene Neighboring gene REST corepressor 3 Neighboring gene putative uncharacterized protein encoded by LINC00467 homolog Neighboring gene actin-related protein 2/3 complex subunit 3 pseudogene Neighboring gene RD3 regulator of GUCY2D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thioesterase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K63-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of plasma membrane signaling receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TNF receptor-associated factor 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    68814132..68861313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015117425.2 → XP_014972911.1  TNF receptor-associated factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A5F8AI01, H9ZD17
    Conserved Domains (5) summary
    COG1196
    Location:233 → 398
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02176
    Location:183 → 241
    zf-TRAF; TRAF-type zinc finger
    cd16642
    Location:43 → 85
    mRING-HC-C3HC3D_TRAF5; Modified RING finger, HC subclass (C3HC3D-type), found in tumor necrosis factor (TNF) receptor-associated factor 5 (TRAF5) and similar proteins
    cl02446
    Location:404 → 550
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
    cl40617
    Location:128 → 183
    zf-TRAF; TRAF-type zinc finger

  2. XM_015117407.2 → XP_014972893.1  TNF receptor-associated factor 5 isoform X1

    UniProtKB/TrEMBL
    H9ZD17
    Conserved Domains (3) summary
    smart00184
    Location:60 → 96
    RING; Ring finger
    pfam02176
    Location:198 → 256
    zf-TRAF; TRAF-type zinc finger
    cl02446
    Location:419 → 565
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...

  3. XM_028852879.1 → XP_028708712.1  TNF receptor-associated factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A5F8AI01, H9ZD17
    Related
    ENSMMUP00000065408.1, ENSMMUT00000087102.1
    Conserved Domains (5) summary
    COG1196
    Location:233 → 398
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02176
    Location:183 → 241
    zf-TRAF; TRAF-type zinc finger
    cd16642
    Location:43 → 85
    mRING-HC-C3HC3D_TRAF5; Modified RING finger, HC subclass (C3HC3D-type), found in tumor necrosis factor (TNF) receptor-associated factor 5 (TRAF5) and similar proteins
    cl02446
    Location:404 → 550
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
    cl40617
    Location:128 → 183
    zf-TRAF; TRAF-type zinc finger

  4. XM_028852877.1 → XP_028708710.1  TNF receptor-associated factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A5F8AI01, H9ZD17
    Conserved Domains (5) summary
    COG1196
    Location:233 → 398
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02176
    Location:183 → 241
    zf-TRAF; TRAF-type zinc finger
    cd16642
    Location:43 → 85
    mRING-HC-C3HC3D_TRAF5; Modified RING finger, HC subclass (C3HC3D-type), found in tumor necrosis factor (TNF) receptor-associated factor 5 (TRAF5) and similar proteins
    cl02446
    Location:404 → 550
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
    cl40617
    Location:128 → 183
    zf-TRAF; TRAF-type zinc finger

  5. XM_015117415.2 → XP_014972901.1  TNF receptor-associated factor 5 isoform X2

    UniProtKB/TrEMBL
    F7FNK1, H9ZD17
    Related
    ENSMMUP00000038268.2, ENSMMUT00000045246.3
    Conserved Domains (3) summary
    smart00184
    Location:57 → 93
    RING; Ring finger
    pfam02176
    Location:195 → 253
    zf-TRAF; TRAF-type zinc finger
    cl02446
    Location:416 → 562
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
Nucleotide Protein
Heading Accession and Version

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