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zpax4 zona pellucida protein AX 4 [ Danio rerio (zebrafish) ]

Gene ID: 798996, updated on 27-Mar-2024

Summary

Official Symbol
zpax4provided by ZNC
Official Full Name
zona pellucida protein AX 4provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-6199
See related
Ensembl:ENSDARG00000079034 AllianceGenome:ZFIN:ZDB-GENE-030131-6199
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fi33e12; fi38e01; wu:fi33e12; wu:fi38e01; si:dkey-19b23.11
Orthologs
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Genomic context

See zpax4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (20577694..20582851, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (20325726..20330883, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene zgc:158423 Neighboring gene si:dkey-19b23.10 Neighboring gene uncharacterized LOC108190658 Neighboring gene si:dkey-19b23.7 Neighboring gene si:dkey-19b23.8

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
zona pellucida protein AX 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001204179.1NP_001191108.1  zona pellucida protein AX 4 precursor

    Status: VALIDATED

    Source sequence(s)
    BI843123, BM775738, EG577874, EG586235, EV604559
    UniProtKB/TrEMBL
    A0A8M1NYL5, F1R4N4
    Related
    ENSDARP00000099884.2, ENSDART00000111719.4
    Conserved Domains (1) summary
    smart00241
    Location:643725
    ZP; Zona pellucida (ZP) domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    20577694..20582851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394685.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    189152..194309 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)