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AT1G68780 RNI-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843209, updated on 7-Sep-2023

Summary

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Gene symbol
AT1G68780
Gene description
RNI-like superfamily protein
Primary source
Araport:AT1G68780
Locus tag
AT1G68780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14K14.11; F14K14_11
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Genomic context

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See AT1G68780 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (25831662..25833966, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nudix hydrolase 1 Neighboring gene tRNA-Pro Neighboring gene Putative membrane lipoprotein Neighboring gene little nuclei3 Neighboring gene CLAVATA3/ESR-RELATED 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_105551.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within signal transduction IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
RNI-like superfamily protein
NP_564942.1
  • RNI-like superfamily protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G25670.1); Has 76880 Blast hits to 27020 proteins in 1013 species: Archae - 25; Bacteria - 5064; Metazoa - 15853; Fungi - 790; Plants - 50474; Viruses - 2; Other Eukaryotes - 4672 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    25831662..25833966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105551.3 → NP_564942.1  RNI-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564942.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WA38, A0A5S9WQN5, Q9CA41
    Conserved Domains (2) summary
    PLN00113
    Location:108 → 381
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:149 → 173
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
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