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    LOC643381 zinc finger protein 614 pseudogene [ Homo sapiens (human) ]

    Gene ID: 643381, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC643381
    Gene description
    zinc finger protein 614 pseudogene
    See related
    Ensembl:ENSG00000254939
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC643381 in Genome Data Viewer
    Location:
    11q22.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (98564877..98567029, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (98570995..98573148, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (98435607..98437759, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 793 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:98077541-98078042 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:98078043-98078542 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:98323806-98324306 Neighboring gene uncharacterized LOC105369455 Neighboring gene NANOG hESC enhancer GRCh37_chr11:98366426-98366927 Neighboring gene MPRA-validated peak1422 silencer Neighboring gene MPRA-validated peak1423 silencer Neighboring gene MPRA-validated peak1424 silencer Neighboring gene MPRA-validated peak1425 silencer Neighboring gene MPRA-validated peak1427 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:98472057-98472556 Neighboring gene MPRA-validated peak1429 silencer Neighboring gene MPRA-validated peak1430 silencer Neighboring gene MPRA-validated peak1431 silencer Neighboring gene MPRA-validated peak1433 silencer Neighboring gene MPRA-validated peak1434 silencer Neighboring gene MPRA-validated peak1435 silencer Neighboring gene MPRA-validated peak1437 silencer Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_21952 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_22004 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_22054 Neighboring gene contactin 5 Neighboring gene RN7SK pseudogene 53 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_22152 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_22162 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_22201 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_22214 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:99195590-99196789 Neighboring gene NANOG hESC enhancer GRCh37_chr11:99289721-99290406 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:99293814-99294789 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_22279 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:99454493-99454616 Neighboring gene uncharacterized LOC107984431

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_021802.2 

      Range
      1..2153
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      98564877..98567029 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      98570995..98573148 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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