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    WDHD1 WD repeat and HMG-box DNA binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695910, updated on 5-Mar-2024

    Summary

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    Official Symbol
    WDHD1provided by VGNC
    Official Full Name
    WD repeat and HMG-box DNA binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:79376
    See related
    Ensembl:ENSMMUG00000000302
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See WDHD1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (117049824..117135765, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (116902025..116988234, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene U6atac minor spliceosomal RNA Neighboring gene GTP cyclohydrolase 1 Neighboring gene farnesyl pyrophosphate synthase pseudogene Neighboring gene 60S ribosomal protein L31 pseudogene Neighboring gene 40S ribosomal protein SA-like Neighboring gene suppressor of cytokine signaling 4 Neighboring gene mitogen-activated protein kinase 1 interacting protein 1 like Neighboring gene small nucleolar RNA U3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA-templated DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear replication fork IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat and HMG-box DNA-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      117049824..117135765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143730.2 → XP_014999216.2  WD repeat and HMG-box DNA-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      I0FNV9
      Conserved Domains (4) summary
      smart00398
      Location:892 → 949
      HMG; high mobility group
      sd00039
      Location:17 → 58
      7WD40; WD40 repeat [structural motif]
      pfam12341
      Location:307 → 590
      Mcl1_mid; Minichromosome loss protein, Mcl1, middle region
      cl29593
      Location:5 → 165
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_015143731.2 → XP_014999217.2  WD repeat and HMG-box DNA-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      I0FNV9
      Conserved Domains (4) summary
      smart00398
      Location:892 → 949
      HMG; high mobility group
      sd00039
      Location:17 → 58
      7WD40; WD40 repeat [structural motif]
      pfam12341
      Location:307 → 590
      Mcl1_mid; Minichromosome loss protein, Mcl1, middle region
      cl29593
      Location:5 → 165
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_015143729.2 → XP_014999215.2  WD repeat and HMG-box DNA-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      I0FNV9
      Conserved Domains (4) summary
      smart00398
      Location:984 → 1041
      HMG; high mobility group
      sd00039
      Location:17 → 52
      7WD40; WD40 repeat [structural motif]
      pfam12341
      Location:400 → 682
      Mcl1_mid; Minichromosome loss protein, Mcl1, middle region
      cl29593
      Location:10 → 257
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_015143727.2 → XP_014999213.2  WD repeat and HMG-box DNA-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      I0FNV9
      Related
      ENSMMUP00000000409.4, ENSMMUT00000000441.4
      Conserved Domains (4) summary
      smart00398
      Location:1013 → 1070
      HMG; high mobility group
      cd00200
      Location:10 → 288
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:21 → 54
      7WD40; WD40 repeat [structural motif]
      pfam12341
      Location:431 → 713
      Mcl1_mid; Minichromosome loss protein, Mcl1, middle region

    5. XM_015143726.2 → XP_014999212.2  WD repeat and HMG-box DNA-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QW14, I0FNV9
      Related
      ENSMMUP00000052244.2, ENSMMUT00000067415.2
      Conserved Domains (4) summary
      smart00398
      Location:1015 → 1072
      HMG; high mobility group
      cd00200
      Location:10 → 288
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:21 → 54
      7WD40; WD40 repeat [structural motif]
      pfam12341
      Location:431 → 713
      Mcl1_mid; Minichromosome loss protein, Mcl1, middle region
    Nucleotide Protein
    Heading Accession and Version

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