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    FRMD6-AS1 FRMD6 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 145438, updated on 10-Oct-2023

    Summary

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    Official Symbol
    FRMD6-AS1provided by HGNC
    Official Full Name
    FRMD6 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:20129
    See related
    Ensembl:ENSG00000258537 AllianceGenome:HGNC:20129
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C14orf82
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    Genomic context

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    See FRMD6-AS1 in Genome Data Viewer
    Location:
    14q22.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (51649516..51651744, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (45856429..45858656, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (52116234..52118462, complement)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene FERM domain containing 6 Neighboring gene FRMD6 antisense RNA 2 Neighboring gene RNA, U6 small nuclear 1291, pseudogene Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:52000910-52002109 Neighboring gene uncharacterized LOC124903415 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8374 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:52117631-52118249 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5737 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5738 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5739 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5740 Neighboring gene RNA, 5S ribosomal pseudogene 385 Neighboring gene RNA, U6 small nuclear 301, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. LncRNA FRMD6-AS1 promotes hepatocellular carcinoma cell migration and stemness by regulating SENP1/HIF-1α axis. Sun W, et al. Pathol Res Pract, 2023 Mar. PMID 36827886
    2. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. LncRNA FRMD6-AS1 promotes hepatocellular carcinoma cell migration and stemness by regulating SENP1/HIF-1alpha axis.
      Title: LncRNA FRMD6-AS1 promotes hepatocellular carcinoma cell migration and stemness by regulating SENP1/HIF-1α axis.
    Submit: New GeneRIF Correction

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Markers

    Other Names

    • FRMD6 antisense RNA 1 (non-protein coding)

    Clone Names

    • FLJ12375

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_037676.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK022437, BX104826, W44516
      Related
      ENST00000617151.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      51649516..51651744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      45856429..45858656 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C7T7.1 GenPept UniProtKB/Swiss-Prot:P0C7T7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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