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    LOC101927263 uncharacterized LOC101927263 [ Homo sapiens (human) ]

    Gene ID: 101927263, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC101927263
    Gene description
    uncharacterized LOC101927263
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC101927263 in Genome Data Viewer
    Location:
    15q26.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (96351353..96395016)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (94115952..94159589)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene NR2F2 antisense RNA 1 Neighboring gene uncharacterized LOC124903584 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr15:96794933-96796132 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:96811550-96812164 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr15:96816434-96817633 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6852 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:96876956-96877918 Neighboring gene Sharpr-MPRA regulatory region 11279 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:96884589-96885109 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:96885110-96885629 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:96897481-96898380 Neighboring gene microRNA 1469 Neighboring gene nuclear receptor subfamily 2 group F member 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:96901703-96902545 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr15:96905583-96906432 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr15:96934820-96936019 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:96943980-96944194 Neighboring gene Sharpr-MPRA regulatory region 9726 Neighboring gene tubulin alpha pseudogene 12 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:96959267-96960130 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:96960131-96960994 Neighboring gene phosphoglycerate mutase 1 pseudogene 12 Neighboring gene ribosomal protein L31 pseudogene 55

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      96351353..96395016
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007064788.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      94115952..94159589
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007085496.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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