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    LOC728554 THO complex 3 pseudogene [ Homo sapiens (human) ]

    Gene ID: 728554, updated on 8-Nov-2023

    Summary

    Gene symbol
    LOC728554
    Gene description
    THO complex 3 pseudogene
    See related
    Ensembl:ENSG00000291113
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in esophagus (RPKM 28.0), testis (RPKM 21.1) and 24 other tissues See more
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    Genomic context

    See LOC728554 in Genome Data Viewer
    Location:
    5q35.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (177875261..177884268)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (178419649..178428672)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (177302262..177311269)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 1 subfamily X member 5 pseudogene Neighboring gene uncharacterized LOC105377753 Neighboring gene uncharacterized LOC124901146 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:177357323-177358130 Neighboring gene uncharacterized LOC100128340 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:177366549-177367149 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:177385067-177385586

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003615.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC106795
      Related
      ENST00000506672.6

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      177875261..177884268
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187546.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      9797..18804
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_2

    Genomic

    1. NT_187652.1 Reference GRCh38.p14 ALT_REF_LOCI_2

      Range
      9797..18804
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      178419649..178428672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)