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    SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695741, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SMARCAL1provided by VGNC
    Official Full Name
    SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1provided by VGNC
    Primary source
    VGNC:VGNC:77650
    See related
    Ensembl:ENSMMUG00000019539
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SMARCAL1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (103783324..103874418)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (98491462..98558806)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene X-ray repair cross complementing 5 Neighboring gene membrane associated ring-CH-type finger 4 Neighboring gene uncharacterized LOC106992720 Neighboring gene chromobox protein homolog 3-like Neighboring gene uncharacterized LOC106992721 Neighboring gene uncharacterized LOC114671413 Neighboring gene ribosomal protein L37a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in replication fork processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear replication fork IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
    XP_028686926.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      103783324..103874418
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831093.1 → XP_028686926.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1

      UniProtKB/TrEMBL
      F7CQX8, H9Z9G3
      Related
      ENSMMUP00000025671.4, ENSMMUT00000027448.4
      Conserved Domains (3) summary
      pfam07443
      Location:243 → 296
      HARP; HepA-related protein (HARP)
      cd18793
      Location:703 → 828
      SF2_C_SNF; C-terminal helicase domain of the SNF family helicases
      cd18010
      Location:431 → 640
      DEXHc_HARP_SMARCAL1; DEXH-box helicase domain of SMARCAL1
    Nucleotide Protein
    Heading Accession and Version

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