U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LINC02375 long intergenic non-protein coding RNA 2375 [ Homo sapiens (human) ]

    Gene ID: 101927616, updated on 10-Oct-2023

    Summary

    Official Symbol
    LINC02375provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2375provided by HGNC
    Primary source
    HGNC:HGNC:53297
    See related
    Ensembl:ENSG00000256362 AllianceGenome:HGNC:53297
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.0) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    12q24.32
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (127324155..127340072, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (127349020..127364938, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (127808700..127824617, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene transmembrane protein 132B pseudogene Neighboring gene RNA, U1 small nuclear 104, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:127858323-127858824 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5086 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:127887250-127887445 Neighboring gene uncharacterized LOC105370066 Neighboring gene uncharacterized LOC105370067

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Electronic medical records and genomics (eMERGE) network exploration in cataract: Several new potential susceptibility loci.
    EBI GWAS Catalog
    Genome-wide association scan of trait depression.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110057.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073913
      Related
      ENST00000545739.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      127324155..127340072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      127349020..127364938 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)