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    SNORA72 small nucleolar RNA, H/ACA box 72 [ Homo sapiens (human) ]

    Gene ID: 26775, updated on 10-Oct-2023

    Summary

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    Official Symbol
    SNORA72provided by HGNC
    Official Full Name
    small nucleolar RNA, H/ACA box 72provided by HGNC
    Primary source
    HGNC:HGNC:10234
    See related
    Ensembl:ENSG00000207067 AllianceGenome:HGNC:10234
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U72; RNU72
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    Genomic context

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    See SNORA72 in Genome Data Viewer
    Location:
    8q22.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (98042086..98042217, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (99167570..99167701, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (99054314..99054445, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:98880393-98880892 Neighboring gene ribosomal protein S23 pseudogene 1 Neighboring gene matrilin 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:98909071-98909570 Neighboring gene uncharacterized LOC124901987 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:98962761-98963312 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:98963313-98963863 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27670 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:99019619-99020119 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:99023104-99023762 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_103766 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_103770 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:99044769-99045968 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27671 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27672 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:99057921-99058857 Neighboring gene RNA, U6 small nuclear 703, pseudogene Neighboring gene ribosomal protein L30 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19393 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27675 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19394 Neighboring gene glutamate rich 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27676

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. Ganot P, et al. Genes Dev, 1997 Apr 1. PMID 9106664
    2. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. Ofengand J, et al. J Mol Biol, 1997 Feb 21. PMID 9047361
    3. Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. Ganot P, et al. Cell, 1997 May 30. PMID 9182768
    4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. Dieci G, et al. Genomics, 2009 Aug. PMID 19446021

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • RNA, U72 small nucleolar
    • U72 small nucleolar RNA
    • U72 snoRNA

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002581.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      Y11167
      Related
      ENST00000384339.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      98042086..98042217 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      99167570..99167701 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Chemical Information
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