U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gm1604b predicted gene 1604b [ Mus musculus (house mouse) ]

    Gene ID: 381059, updated on 22-May-2024

    Summary

    Official Symbol
    Gm1604bprovided by MGI
    Official Full Name
    predicted gene 1604bprovided by MGI
    Primary source
    MGI:MGI:2686450
    See related
    Ensembl:ENSMUSG00000023809 AllianceGenome:MGI:2686450
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1604
    Expression
    Broad expression in frontal lobe adult (RPKM 2.6), cortex adult (RPKM 1.7) and 17 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gm1604b in Genome Data Viewer
    Location:
    17 A1; 17 4.61 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (7292942..7354996)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (7025543..7087597)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr17:7165470-7165771 Neighboring gene STARR-positive B cell enhancer ABC_E2470 Neighboring gene T cell activation GTPase activating protein 1 Neighboring gene STARR-seq mESC enhancer starr_41744 Neighboring gene ribonuclease T2B Neighboring gene predicted gene, 25119 Neighboring gene STARR-seq mESC enhancer starr_41745 Neighboring gene ribosomal protein S6 kinase, polypeptide 2 Neighboring gene STARR-positive B cell enhancer mm9_chr17:7374004-7374305 Neighboring gene STARR-seq mESC enhancer starr_41746 Neighboring gene VISTA enhancer mm108 Neighboring gene STARR-seq mESC enhancer starr_41751 Neighboring gene G protein-coupled receptor 31, D17Leh66a region

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC381059

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033442.3NP_001028614.1  uncharacterized protein LOC381059

      See identical proteins and their annotated locations for NP_001028614.1

      Status: VALIDATED

      Source sequence(s)
      AC122413, AK162826
      Consensus CDS
      CCDS28375.1
      UniProtKB/TrEMBL
      Q3TRG0
      Related
      ENSMUST00000097422.7

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      7292942..7354996
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)