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    Or4x13 olfactory receptor family 4 subfamily X member 13 [ Mus musculus (house mouse) ]

    Gene ID: 258330, updated on 11-Apr-2024

    Summary

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    Official Symbol
    Or4x13provided by MGI
    Official Full Name
    olfactory receptor family 4 subfamily X member 13provided by MGI
    Primary source
    MGI:MGI:3031108
    See related
    Ensembl:ENSMUSG00000082980 AllianceGenome:MGI:3031108
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MOR228-4; MOR228-5; Olfr1274; Olfr1274-ps; GA_x5J8B7W2BV0-3116-4045
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
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    Genomic context

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    See Or4x13 in Genome Data Viewer
    Location:
    2 E1; 2 50.19 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (90230984..90232018)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (90400640..90401674)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 39869 Neighboring gene protein tyrosine phosphatase, receptor type, J pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr2:90269816-90270116 Neighboring gene STARR-seq mESC enhancer starr_05082 Neighboring gene protein tyrosine phosphatase receptor type J Neighboring gene STARR-seq mESC enhancer starr_05083 Neighboring gene STARR-positive B cell enhancer ABC_E329 Neighboring gene STARR-seq mESC enhancer starr_05085 Neighboring gene STARR-seq mESC enhancer starr_05087 Neighboring gene STARR-positive B cell enhancer ABC_E11146 Neighboring gene STARR-positive B cell enhancer ABC_E9516 Neighboring gene STARR-seq mESC enhancer starr_05090 Neighboring gene STARR-positive B cell enhancer ABC_E10123 Neighboring gene predicted gene, 46752

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Odorant and vomeronasal receptor genes in two mouse genome assemblies. Zhang X, et al. Genomics, 2004 May. PMID 15081110
    2. The olfactory receptor gene superfamily of the mouse. Zhang X, et al. Nat Neurosci, 2002 Feb. PMID 11802173
    3. Different evolutionary processes shaped the mouse and human olfactory receptor gene families. Young JM, et al. Hum Mol Genet, 2002 Mar 1. PMID 11875048
    4. Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Young JM, et al. Genome Biol, 2003. PMID 14611657, Free PMC Article
    5. A unified nomenclature for vertebrate olfactory receptors. Olender T, et al. BMC Evol Biol, 2020 Apr 15. PMID 32295537, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables olfactory receptor activity ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    acts_upstream_of_or_within detection of chemical stimulus involved in sensory perception of smell ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    acts_upstream_of_or_within sensory perception of smell ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    olfactory receptor 1274
    Names
    GA_x6K02T2Q125-51676372-51677301
    olfactory receptor 1274, pseudogene
    olfactory receptor GA_x5J8B7W2BV0-3116-4045
    olfactory receptor MOR228-4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_146263.2 → NP_666375.2  olfactory receptor 1274

      Status: VALIDATED

      Source sequence(s)
      AL954341
      Consensus CDS
      CCDS89510.1
      UniProtKB/TrEMBL
      A0A1L1SQ02, Q7TQY9
      Related
      ENSMUSP00000151089.2, ENSMUST00000120681.3
      Conserved Domains (2) summary
      pfam00001
      Location:39 → 285
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:29 → 297
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      90230984..90232018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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