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    Cyp7a1 cytochrome P450, family 7, subfamily a, polypeptide 1 [ Mus musculus (house mouse) ]

    Gene ID: 13122, updated on 30-Apr-2024

    Summary

    Official Symbol
    Cyp7a1provided by MGI
    Official Full Name
    cytochrome P450, family 7, subfamily a, polypeptide 1provided by MGI
    Primary source
    MGI:MGI:106091
    See related
    Ensembl:ENSMUSG00000028240 AllianceGenome:MGI:106091
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CYPVII; CYPVIIc
    Summary
    Enables cholesterol 7-alpha-monooxygenase activity. Acts upstream of or within cholesterol catabolic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in liver. Orthologous to human CYP7A1 (cytochrome P450 family 7 subfamily A member 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in liver E18 (RPKM 9.1) and liver adult (RPKM 7.9) See more
    Orthologs
    NEW
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    Genomic context

    Location:
    4 A1; 4 2.91 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (6265612..6275632, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (6265612..6275632, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene Ras suppressor protein 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_09476 Neighboring gene STARR-positive B cell enhancer ABC_E3480 Neighboring gene UBX domain protein 2B Neighboring gene Cyp7a1 promoter Neighboring gene STARR-seq mESC enhancer starr_09478 Neighboring gene STARR-seq mESC enhancer starr_09479 Neighboring gene RIKEN cDNA 4930430E12 gene Neighboring gene syndecan binding protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (3)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables 24-hydroxycholesterol 7alpha-hydroxylase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables cholesterol 7-alpha-monooxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cholesterol 7-alpha-monooxygenase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables cholesterol 7-alpha-monooxygenase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in bile acid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in bile acid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to cholesterol ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to glucose stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within cholesterol catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cholesterol catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cholesterol homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cholesterol homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within cholesterol metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of collagen biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of fatty acid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of bile acid biosynthetic process TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of cholesterol biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of bile acid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within steroid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cytochrome P450 7A1
    Names
    24-hydroxycholesterol 7-alpha-hydroxylase
    cholesterol 7-alpha-hydroxylase
    cholesterol 7-alpha-monooxygenase
    cytochrome P450, 7a1
    NP_031850.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007824.3NP_031850.2  cytochrome P450 7A1

      See identical proteins and their annotated locations for NP_031850.2

      Status: VALIDATED

      Source sequence(s)
      AK050210, AK050260
      Consensus CDS
      CCDS17950.1
      UniProtKB/Swiss-Prot
      Q64505, Q8BFR7
      UniProtKB/TrEMBL
      A1L3S6
      Related
      ENSMUSP00000029905.2, ENSMUST00000029905.2
      Conserved Domains (1) summary
      cd20631
      Location:55497
      CYP7A1; cytochrome P450 family 7, subfamily A, polypeptide 1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      6265612..6275632 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)