hnrnpa0l heterogeneous nuclear ribonucleoprotein A0, like [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: hnrnpa0lprovided by ZNC
Official Full Name: heterogeneous nuclear ribonucleoprotein A0, likeprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-618
See related: Ensembl:ENSDARG00000036161 AllianceGenome:ZFIN:ZDB-GENE-030131-618
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fb38a07; hnrpa0l; wu:fb38a07; wu:fb82e07
Summary: Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. Is expressed in liver. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 14

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	14	NC_007125.7 (38849500..38850933)
105	previous assembly	GRCz10 (GCF_000002035.5)	14	NC_007125.6 (38509186..38510619)

Chromosome 14 - NC_007125.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables mRNA 3'-UTR binding	IBA Inferred from Biological aspect of Ancestor more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in mRNA splicing, via spliceosome	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of catalytic step 2 spliceosome	IBA Inferred from Biological aspect of Ancestor more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: heterogeneous nuclear ribonucleoprotein A0, like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001281721.1 → NP_001268650.1 heterogeneous nuclear ribonucleoprotein A0, like

See identical proteins and their annotated locations for NP_001268650.1

Status: VALIDATED

Source sequence(s)

BC050513

UniProtKB/TrEMBL

A0A8M1P603, Q7ZU48

Related

ENSDARP00000052510.4, ENSDART00000052511.6

Conserved Domains (2) summary

cd12326
Location:4 → 82

RRM1_hnRNPA0; RNA recognition motif 1 found in heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0) and similar proteins

cl17169
Location:98 → 177

RRM_SF; RNA recognition motif (RRM) superfamily