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    Ceacam9 CEA cell adhesion molecule 9 [ Mus musculus (house mouse) ]

    Gene ID: 26368, updated on 9-May-2024

    Summary

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    Official Symbol
    Ceacam9provided by MGI
    Official Full Name
    CEA cell adhesion molecule 9provided by MGI
    Primary source
    MGI:MGI:1347247
    See related
    Ensembl:ENSMUSG00000007209 AllianceGenome:MGI:1347247
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cea5; Cea-5; mmCGM8
    Summary
    Predicted to be located in apical plasma membrane. Is expressed in placenta and primary trophoblast giant cell. Orthologous to several human genes including CEACAM21 (CEA cell adhesion molecule 21). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward placenta adult (RPKM 28.0) See more
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    Genomic context

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    See Ceacam9 in Genome Data Viewer
    Location:
    7 A2; 7 9.15 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (16455854..16460035)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (16721929..16726110)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 8209 Neighboring gene 40S RIBOSOMAL PROTEIN S3A (V-FOS TRANSFORMATION EFFECTOR PROTEIN) Neighboring gene STARR-positive B cell enhancer ABC_E3700 Neighboring gene STARR-positive B cell enhancer ABC_E4899 Neighboring gene STARR-positive B cell enhancer ABC_E6517 Neighboring gene adaptor-related protein complex 2, sigma 1 subunit Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:17351790-17352086 Neighboring gene STARR-positive B cell enhancer ABC_E694 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:17368547-17368700 Neighboring gene solute carrier family 1 (neutral amino acid transporter), member 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. cea5, a structurally divergent member of the murine carcinoembryonic antigen gene family, is exclusively expressed during early placental development in trophoblast giant cells. Finkenzeller D, et al. J Biol Chem, 1997 Dec 12. PMID 9395467
    2. Trophoblast cell-specific carcinoembryonic antigen cell adhesion molecule 9 is not required for placental development or a positive outcome of allotypic pregnancies. Finkenzeller D, et al. Mol Cell Biol, 2000 Oct. PMID 10982830, Free PMC Article
    3. Coordinate expression of splice variants of the murine pregnancy-specific glycoprotein (PSG) gene family during placental development. Kromer B, et al. Eur J Biochem, 1996 Dec 1. PMID 8973644
    4. Carcinoembryonic antigen-related cell adhesion molecule 10 expressed specifically early in pregnancy in the decidua is dispensable for normal murine development. Finkenzeller D, et al. Mol Cell Biol, 2003 Jan. PMID 12482980, Free PMC Article
    5. Mouse pregnancy-specific glycoproteins: tissue-specific expression and evidence of association with maternal vasculature. Wynne F, et al. Reproduction, 2006 Apr. PMID 16595723

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1)  1 citation

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    CEA cell adhesion molecule 9
    Names
    CEA-related cell adhesion molecule 9
    carcinoembryonic antigen 5
    carcinoembryonic antigen-related cell adhesion molecule 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011927.4 → NP_036057.1  CEA cell adhesion molecule 9 precursor

      See identical proteins and their annotated locations for NP_036057.1

      Status: PROVISIONAL

      Source sequence(s)
      AC148981
      Consensus CDS
      CCDS20852.1
      UniProtKB/TrEMBL
      Q78T27
      Related
      ENSMUSP00000001984.4, ENSMUST00000001984.5
      Conserved Domains (3) summary
      cd05774
      Location:35 → 139
      Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)
      smart00408
      Location:159 → 220
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:152 → 219
      IG_like; Immunoglobulin like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      16455854..16460035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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