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    rsrp1 arginine/serine-rich protein 1 [ Danio rerio (zebrafish) ]

    Gene ID: 724003, updated on 27-Mar-2024

    Summary

    Official Symbol
    rsrp1provided by ZNC
    Official Full Name
    arginine/serine-rich protein 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060616-210
    See related
    Ensembl:ENSDARG00000030440 AllianceGenome:ZFIN:ZDB-GENE-060616-210
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fc15g08; zgc:136474
    Summary
    Orthologous to human RSRP1 (arginine and serine rich protein 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See rsrp1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (45468407..45475305, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (45331503..45338398, complement)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene zinc finger-like gene 1g Neighboring gene SYF2 pre-mRNA-splicing factor Neighboring gene microsomal glutathione S-transferase 3b Neighboring gene transmembrane protein 50A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    arginine/serine-rich protein 1
    Names
    UPF0471 protein C1orf63 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001045308.2NP_001038773.2  arginine/serine-rich protein 1

      Status: VALIDATED

      Source sequence(s)
      EH442236, EH444294, EH499185, EH506060
      UniProtKB/Swiss-Prot
      Q1ECZ9
      UniProtKB/TrEMBL
      A0A8M3AZF4, B8A501, F1RCH3
      Related
      ENSDARP00000043344.6, ENSDART00000043345.7
      Conserved Domains (1) summary
      pfam17069
      Location:102312
      RSRP; Arginine/Serine-Rich protein 1

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      45468407..45475305 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009307579.3XP_009305854.1  arginine/serine-rich protein 1 isoform X1

      See identical proteins and their annotated locations for XP_009305854.1

      UniProtKB/Swiss-Prot
      Q1ECZ9
      UniProtKB/TrEMBL
      A0A8M3AZF4, B8A501, F1RCH3
      Conserved Domains (1) summary
      pfam17069
      Location:102312
      RSRP; Arginine/Serine-Rich protein 1
    2. XM_009307578.3XP_009305853.1  arginine/serine-rich protein 1 isoform X1

      See identical proteins and their annotated locations for XP_009305853.1

      UniProtKB/Swiss-Prot
      Q1ECZ9
      UniProtKB/TrEMBL
      A0A8M3AZF4, B8A501, F1RCH3
      Conserved Domains (1) summary
      pfam17069
      Location:102312
      RSRP; Arginine/Serine-Rich protein 1

    RNA

    1. XR_222146.3 RNA Sequence

    2. XR_222145.3 RNA Sequence

    3. XR_222144.3 RNA Sequence

      Related
      ENSDART00000140371.2