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    FBXO33 F-box protein 33 [ Homo sapiens (human) ]

    Gene ID: 254170, updated on 5-Mar-2024

    Summary

    Official Symbol
    FBXO33provided by HGNC
    Official Full Name
    F-box protein 33provided by HGNC
    Primary source
    HGNC:HGNC:19833
    See related
    Ensembl:ENSG00000165355 MIM:609103; AllianceGenome:HGNC:19833
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    Fbx33; BMND12; c14_5247
    Summary
    This locus represents an member of the F-box gene family. The encoded protein contains an F-box motif and a domain that might form a structure similar to a leucine-rich repeat found in placental RNAse inhibitor. This locus may be associated with copy number variation of UGT2B17 (GeneID 7367), which has been associated with susceptibility to osteoporosis.[provided by RefSeq, Sep 2010]
    Expression
    Ubiquitous expression in bone marrow (RPKM 14.0), testis (RPKM 6.8) and 24 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    14q21.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (39397684..39432433, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (33586312..33624046, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (39866888..39901637, complement)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene MIA SH3 domain ER export factor 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:39839297-39839798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:39839799-39840298 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5689 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5690 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8290 Neighboring gene uncharacterized LOC105370461 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5691 Neighboring gene GLRX5 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8291 Neighboring gene uncharacterized LOC105370460 Neighboring gene coilin pseudogene 1 Neighboring gene uncharacterized LOC112267899 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:40007098-40007598 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:40007599-40008099 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:40058588-40059177 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:40108076-40108576 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:40108577-40109077 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:40142297-40143002 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:40143003-40143708 Neighboring gene NANOG hESC enhancer GRCh37_chr14:40203453-40203986 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:40250573-40251083 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:40317773-40317946 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8292 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8293 Neighboring gene uncharacterized LOC105370464 Neighboring gene uncharacterized LOC105370463

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of protein ubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_027725.1 RefSeqGene

      Range
      5068..39817
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_203301.4NP_976046.1  F-box only protein 33

      See identical proteins and their annotated locations for NP_976046.1

      Status: VALIDATED

      Source sequence(s)
      AL049875, AL157791
      Consensus CDS
      CCDS9677.1
      UniProtKB/Swiss-Prot
      Q6PIR2, Q7Z6M2, Q86TR2, Q86YE0
      Related
      ENSP00000298097.7, ENST00000298097.8
      Conserved Domains (1) summary
      pfam12937
      Location:69116
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      39397684..39432433 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      33586312..33624046 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)