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    ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 [ Gallus gallus (chicken) ]

    Gene ID: 418479, updated on 9-Mar-2024

    Summary

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    Symbol
    ADAMTS1provided by CGNC
    Full Name
    ADAM metallopeptidase with thrombospondin type 1 motif 1provided by CGNC
    Primary source
    CGNC:50780
    See related
    Ensembl:ENSGALG00010010659
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ADAMTS1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (103129744..103137062, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (103217651..103224976, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein Neighboring gene cysteine and tyrosine rich 1 Neighboring gene uncharacterized LOC124417328 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 5 Neighboring gene uncharacterized LOC124417635

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in extracellular matrix organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    A disintegrin and metalloproteinase with thrombospondin motifs 1; LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 1
    XP_015154663.2
    XP_040514721.1
    XP_040514722.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      103129744..103137062 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015299177.4 → XP_015154663.2  LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y1A4
      Related
      ENSGALP00010014350.1, ENSGALT00010025365.1
      Conserved Domains (4) summary
      smart00209
      Location:504 → 556
      TSP1; Thrombospondin type 1 repeats
      cd04273
      Location:200 → 406
      ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
      pfam05986
      Location:667 → 784
      ADAM_spacer1; ADAM-TS Spacer 1
      cl15456
      Location:419 → 490
      ADAM_CR; ADAM cysteine-rich

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      103217651..103224976 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040658788.2 → XP_040514722.1  A disintegrin and metalloproteinase with thrombospondin motifs 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YEF2
      Conserved Domains (4) summary
      smart00209
      Location:472 → 524
      TSP1; Thrombospondin type 1 repeats
      cd04273
      Location:168 → 374
      ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
      pfam05986
      Location:635 → 752
      ADAM_spacer1; ADAM-TS Spacer 1
      cl15456
      Location:387 → 458
      ADAM_CR; ADAM cysteine-rich

    2. XM_040658787.2 → XP_040514721.1  A disintegrin and metalloproteinase with thrombospondin motifs 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y1A4
      Conserved Domains (4) summary
      smart00209
      Location:505 → 557
      TSP1; Thrombospondin type 1 repeats
      cd04273
      Location:201 → 407
      ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
      pfam05986
      Location:668 → 785
      ADAM_spacer1; ADAM-TS Spacer 1
      cl15456
      Location:420 → 491
      ADAM_CR; ADAM cysteine-rich
    Nucleotide Protein
    Heading Accession and Version

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