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    ecd ecdysoneless homolog (Drosophila) [ Danio rerio (zebrafish) ]

    Gene ID: 100003562, updated on 27-Mar-2024

    Summary

    Official Symbol
    ecdprovided by ZNC
    Official Full Name
    ecdysoneless homolog (Drosophila)provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6304
    See related
    Ensembl:ENSDARG00000022944 AllianceGenome:ZFIN:ZDB-GENE-030131-6304
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:66126; wu:fi43e02
    Summary
    Predicted to be active in nucleus. Orthologous to human ECD (ecdysoneless cell cycle regulator). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    chromosome: 17
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (20188704..20202725, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (20168868..20182889, complement)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase, alpha polypeptide I b Neighboring gene si:ch211-248a14.8 Neighboring gene gonadotropin-releasing hormone 3 Neighboring gene O-6-methylguanine-DNA methyltransferase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    protein ecdysoneless homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199891.1NP_956185.1  protein ecdysoneless homolog

      See identical proteins and their annotated locations for NP_956185.1

      Status: PROVISIONAL

      Source sequence(s)
      BC055498
      UniProtKB/TrEMBL
      Q7SXQ4
      Related
      ENSDARP00000115988.1, ENSDART00000133650.2
      Conserved Domains (1) summary
      pfam07093
      Location:14591
      SGT1; SGT1 protein

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      20188704..20202725 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394981.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      164090..184652 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)