cfap144 cilia and flagella associated protein 144 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cfap144provided by ZNC
Official Full Name: cilia and flagella associated protein 144provided by ZNC
Primary source: ZFIN:ZDB-GENE-111103-1
See related: Ensembl:ENSDARG00000087144 AllianceGenome:ZFIN:ZDB-GENE-111103-1
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fam183a
Summary: Predicted to be active in ciliary base. Orthologous to several human genes including FAM183A (family with sequence similarity 183 member A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (34138386..34141935, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (34154094..34157649, complement)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
located_in cell projection	IEA Inferred from Electronic Annotation more info
is_active_in ciliary base	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein FAM183A

Names: family with sequence similarity 183 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001326574.2 → NP_001313503.1 protein FAM183A

Status: VALIDATED

Source sequence(s)

EH488166, LO018098

UniProtKB/TrEMBL

A0A8M1P947, E7FBI9

Related

ENSDARP00000110223.1, ENSDART00000127063.3

Conserved Domains (1) summary

pfam14886
Location:18 → 120

FAM183; FAM183A and FAM183B related