cdca5 cell division cycle associated 5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cdca5provided by ZNC
Official Full Name: cell division cycle associated 5provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-235
See related: Ensembl:ENSDARG00000044437 AllianceGenome:ZFIN:ZDB-GENE-030131-235
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fb18a08; wu:fb18a08; wu:fd13f03; si:dkey-273o13.2
Summary: Predicted to be involved in double-strand break repair; mitotic sister chromatid segregation; and regulation of cell cycle process. Predicted to act upstream of or within cell division. Predicted to be located in chromosome. Predicted to be active in nucleus. Orthologous to human CDCA5 (cell division cycle associated 5). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (67175283..67180800, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (66496914..66502431, complement)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fb18a08.x1 (e-PCR)
- UniSTS:190224

fb18a08.x1 (e-PCR)
- UniSTS:190225

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within cell cycle	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cell division	IEA Inferred from Electronic Annotation more info
involved_in double-strand break repair	IBA Inferred from Biological aspect of Ancestor more info
involved_in mitotic metaphase chromosome alignment	IBA Inferred from Biological aspect of Ancestor more info
involved_in mitotic sister chromatid cohesion	IBA Inferred from Biological aspect of Ancestor more info
involved_in positive regulation of exit from mitosis	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in chromosome	IEA Inferred from Electronic Annotation more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: sororin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001100947.1 → NP_001094417.1 sororin

Status: PROVISIONAL

Source sequence(s)

BX897741

UniProtKB/TrEMBL

A0A8M1NE89, A2BIB1

Related

ENSDARP00000065263.6, ENSDART00000065264.7

Conserved Domains (1) summary

pfam09666
Location:124 → 212

Sororin; Sororin protein