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    sup-1 Protein SUP-1 [ Caenorhabditis elegans ]

    Gene ID: 189815, updated on 25-Apr-2024

    Summary

    Gene symbol
    sup-1
    Gene description
    Protein SUP-1
    Primary source
    WormBase:WBGene00012759
    Locus tag
    CELE_Y41C4A.13
    See related
    AllianceGenome:WB:WBGene00012759
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in neuron projection; neuronal cell body membrane; and synapse. Is expressed in body wall musculature; neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See sup-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (11733345..11737627, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Secreted protein Neighboring gene UPF0506 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cell cycle checkpoint protein RAD1 homolog mrt-2

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in neuron projection IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in neuronal cell body membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in perikaryon IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Protein SUP-1
    NP_499520.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      11733345..11737627 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067119.7NP_499520.1  Protein SUP-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499520.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9XWU2
      Conserved Domains (1) summary
      pfam10853
      Location:4985
      DUF2650; Protein of unknown function (DUF2650)