U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CAP1 cyclase associated actin cytoskeleton regulatory protein 1 [ Bos taurus (cattle) ]

    Gene ID: 504519, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CAP1provided by VGNC
    Official Full Name
    cyclase associated actin cytoskeleton regulatory protein 1provided by VGNC
    Primary source
    VGNC:VGNC:26737
    See related
    BGD:BT24709; Ensembl:ENSBTAG00000013363
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CAP1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (106037110..106065747, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene RLF zinc finger Neighboring gene uncharacterized LOC132344934 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene palmitoyl-protein thioesterase 1 Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene uncharacterized LOC132344935 Neighboring gene MFSD2 lysolipid transporter A, lysophospholipid

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Bovine herpesvirus 1 productive infection stimulates inflammasome formation and caspase 1 activity. Wang J, et al. Virus Res, 2014 Jun 24. PMID 24657787, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Bovine herpesvirus 1 infection stimulates caspase 1 activity.
      Title: Bovine herpesvirus 1 productive infection stimulates inflammasome formation and caspase 1 activity.
    Submit: New GeneRIF Correction

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC127425

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables adenylate cyclase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cAMP-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of adenylate cyclase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    adenylyl cyclase-associated protein 1
    Names
    CAP 1
    CAP, adenylate cyclase-associated protein 1
    adenylate cyclase associated protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035010.2 → NP_001030182.1  adenylyl cyclase-associated protein 1

      See identical proteins and their annotated locations for NP_001030182.1

      Status: PROVISIONAL

      Source sequence(s)
      BC103366
      UniProtKB/Swiss-Prot
      Q3SYV4
      UniProtKB/TrEMBL
      A0A3Q1LJQ7
      Conserved Domains (2) summary
      pfam01213
      Location:7 → 291
      CAP_N; Adenylate cyclase associated (CAP) N terminal
      pfam08603
      Location:321 → 470
      CAP_C; Adenylate cyclase associated (CAP) C terminal

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      106037110..106065747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005204657.3 → XP_005204714.1  adenylyl cyclase-associated protein 1 isoform X2

      See identical proteins and their annotated locations for XP_005204714.1

      UniProtKB/TrEMBL
      A0A3Q1LJQ7, A6QLB7
      Conserved Domains (2) summary
      pfam01213
      Location:7 → 290
      CAP_N; Adenylate cyclase associated (CAP) N terminal
      pfam08603
      Location:320 → 469
      CAP_C; Adenylate cyclase associated (CAP) C terminal

    2. XM_005204654.5 → XP_005204711.1  adenylyl cyclase-associated protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005204711.1

      UniProtKB/Swiss-Prot
      Q3SYV4
      UniProtKB/TrEMBL
      A0A3Q1LJQ7
      Conserved Domains (2) summary
      pfam01213
      Location:7 → 291
      CAP_N; Adenylate cyclase associated (CAP) N terminal
      pfam08603
      Location:321 → 470
      CAP_C; Adenylate cyclase associated (CAP) C terminal

    3. XM_005204659.5 → XP_005204716.1  adenylyl cyclase-associated protein 1 isoform X2

      See identical proteins and their annotated locations for XP_005204716.1

      UniProtKB/TrEMBL
      A0A3Q1LJQ7, A6QLB7
      Conserved Domains (2) summary
      pfam01213
      Location:7 → 290
      CAP_N; Adenylate cyclase associated (CAP) N terminal
      pfam08603
      Location:320 → 469
      CAP_C; Adenylate cyclase associated (CAP) C terminal

    4. XM_059882306.1 → XP_059738289.1  adenylyl cyclase-associated protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q3SYV4

    5. XM_005204656.3 → XP_005204713.1  adenylyl cyclase-associated protein 1 isoform X2

      See identical proteins and their annotated locations for XP_005204713.1

      UniProtKB/TrEMBL
      A0A3Q1LJQ7, A6QLB7
      Related
      ENSBTAP00000017775.5, ENSBTAT00000017775.6
      Conserved Domains (2) summary
      pfam01213
      Location:7 → 290
      CAP_N; Adenylate cyclase associated (CAP) N terminal
      pfam08603
      Location:320 → 469
      CAP_C; Adenylate cyclase associated (CAP) C terminal

    6. XM_005204655.5 → XP_005204712.1  adenylyl cyclase-associated protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005204712.1

      UniProtKB/Swiss-Prot
      Q3SYV4
      UniProtKB/TrEMBL
      A0A3Q1LJQ7
      Conserved Domains (2) summary
      pfam01213
      Location:7 → 291
      CAP_N; Adenylate cyclase associated (CAP) N terminal
      pfam08603
      Location:321 → 470
      CAP_C; Adenylate cyclase associated (CAP) C terminal
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SYV4.3 GenPept UniProtKB/Swiss-Prot:Q3SYV4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.