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    NPLOC4 NPL4 homolog, ubiquitin recognition factor [ Gallus gallus (chicken) ]

    Gene ID: 417456, updated on 5-Mar-2024

    Summary

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    Symbol
    NPLOC4provided by CGNC
    Full Name
    NPL4 homolog, ubiquitin recognition factorprovided by CGNC
    Primary source
    CGNC:3388
    See related
    Ensembl:ENSGALG00010029515
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NPLOC4 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (9780812..9808583)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (9380331..9408104)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene oxidoreductase-like domain containing 1 Neighboring gene phosphodiesterase 6G Neighboring gene tetraspanin 10 Neighboring gene uncharacterized LOC123575613 Neighboring gene Fanconi anemia core complex associated protein 100

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear protein localization protein 4 homolog
    Names
    nuclear protein localization 4 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9780812..9808583
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_415704.6 → XP_415704.3  nuclear protein localization protein 4 homolog

      UniProtKB/TrEMBL
      A0A1L1RME9, A0A8V1AMG7
      Related
      ENSGALP00010044033.1, ENSGALT00010071342.1
      Conserved Domains (5) summary
      smart00547
      Location:585 → 607
      ZnF_RBZ; Zinc finger domain
      sd00029
      Location:585 → 604
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam05020
      Location:106 → 246
      zf-NPL4; NPL4 family, putative zinc binding region
      pfam05021
      Location:250 → 557
      NPL4; NPL4 family
      pfam11543
      Location:6 → 79
      UN_NPL4; Nuclear pore localization protein NPL4

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9380331..9408104
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040686515.2 → XP_040542449.1  nuclear protein localization protein 4 homolog

      UniProtKB/TrEMBL
      A0A1L1RME9, A0A8V1AMG7
      Conserved Domains (5) summary
      smart00547
      Location:585 → 607
      ZnF_RBZ; Zinc finger domain
      sd00029
      Location:585 → 604
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam05020
      Location:106 → 246
      zf-NPL4; NPL4 family, putative zinc binding region
      pfam05021
      Location:250 → 557
      NPL4; NPL4 family
      pfam11543
      Location:6 → 79
      UN_NPL4; Nuclear pore localization protein NPL4
    Nucleotide Protein Strain
    Heading Accession and Version

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