timm21 translocase of inner mitochondrial membrane 21 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: timm21provided by ZNC
Official Full Name: translocase of inner mitochondrial membrane 21provided by ZNC
Primary source: ZFIN:ZDB-GENE-120709-89
See related: Ensembl:ENSDARG00000071594 AllianceGenome:ZFIN:ZDB-GENE-120709-89
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: si:dkey-118j18.1
Summary: Predicted to be involved in protein import into mitochondrial matrix. Predicted to be located in membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be part of TIM23 mitochondrial import inner membrane translocase complex. Orthologous to human TIMM21 (translocase of inner mitochondrial membrane 21). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (16140369..16147705)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (15995960..16003286)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in protein import into mitochondrial matrix	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within protein import into mitochondrial matrix	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of TIM23 mitochondrial import inner membrane translocase complex	IBA Inferred from Biological aspect of Ancestor more info
part_of TIM23 mitochondrial import inner membrane translocase complex	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: mitochondrial import inner membrane translocase subunit Tim21; mitochondrial import inner membrane translocase subunit Tim21-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001386503.1 → NP_001373432.1 mitochondrial import inner membrane translocase subunit Tim21-like

Status: VALIDATED

Source sequence(s)

BX005275

UniProtKB/TrEMBL

A0A8N7UVT2, E7F4T6

Conserved Domains (1) summary

pfam08294
Location:94 → 238

TIM21

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007135.7 Reference GRCz11 Primary Assembly

Range

16140369..16147705

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_683774.7 → XP_688866.2 mitochondrial import inner membrane translocase subunit Tim21

UniProtKB/TrEMBL

E7F4T6

Related

ENSDARP00000096733.2, ENSDART00000105955.4

Conserved Domains (1) summary

pfam08294
Location:94 → 238

TIM21