CROCCP3 CROCC pseudogene 3 [Homo sapiens (human)] - Gene

Summary

Official Symbol: CROCCP3provided by HGNC
Official Full Name: CROCC pseudogene 3provided by HGNC
Primary source: HGNC:HGNC:29405
See related: Ensembl:ENSG00000290842 AllianceGenome:HGNC:29405
Gene type: pseudo
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: CROCCL2; dJ798A10.2
Summary: Predicted to be involved in centrosome cycle. Predicted to be located in ciliary rootlet. [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in endometrium (RPKM 1.6), ovary (RPKM 1.5) and 24 other tissues See more
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Genomic context

Location:: 1p36.13

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2023_10	current	GRCh38.p14 (GCF_000001405.40)	1	NC_000001.11 (16467436..16492701, complement)
RS_2023_10	current	T2T-CHM13v2.0 (GCF_009914755.1)	1	NC_060925.1 (15909123..15934359, complement)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	1	NC_000001.10 (16793931..16819196, complement)

Chromosome 1 - NC_000001.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

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See Variation Viewer (GRCh38)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

D1S3581 (e-PCR)
- UniSTS:34315

SHGC-74276 (e-PCR)
- UniSTS:284

RH69968 (e-PCR)
- UniSTS:86650

RH69268 (e-PCR)
- UniSTS:85630

AL009794 (e-PCR)
- UniSTS:66447

A004P30 (e-PCR)
- UniSTS:29593

Other Names

ciliary rootlet coiled-coil, rootletin pseudogene 3
ciliary rootlet coiled-coil, rootletin-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.