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    FHAD1-AS1 FHAD1 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 101927417, updated on 10-Oct-2023

    Summary

    Official Symbol
    FHAD1-AS1provided by HGNC
    Official Full Name
    FHAD1 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:41241
    See related
    Ensembl:ENSG00000233485 AllianceGenome:HGNC:41241
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in adrenal (RPKM 2.4), testis (RPKM 2.4) and 11 other tissues See more
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    Genomic context

    See FHAD1-AS1 in Genome Data Viewer
    Location:
    1p36.21
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (15326680..15343883, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (14771332..14788532, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (15653176..15670379, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene forkhead associated phosphopeptide binding domain 1 Neighboring gene uncharacterized LOC124903853 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:15615395-15616594 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:15631366-15632565 Neighboring gene uncharacterized LOC124903852 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15651115-15651879 Neighboring gene uncharacterized LOC124903851 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 234 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:15678468-15679667 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 235 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15691409-15691909 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:15710597-15711244 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:15711245-15711892 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:15723563-15723730 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:15736144-15737006 Neighboring gene EFHD2 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 302 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15742803-15743302 Neighboring gene Sharpr-MPRA regulatory region 12140 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 303 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15752556-15753456 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15753457-15754355 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15757008-15757508 Neighboring gene EF-hand domain family member D2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:15760169-15760668 Neighboring gene chymotrypsin C

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_148918.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK055853, AL031283, DA879532
      Related
      ENST00000428747.1
    2. NR_148919.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL031283, DA879532

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      15326680..15343883 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      14771332..14788532 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)