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    CLASP2 cytoplasmic linker associated protein 2 [ Bos taurus (cattle) ]

    Gene ID: 531418, updated on 6-Jun-2024

    Summary

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    Official Symbol
    CLASP2provided by VGNC
    Official Full Name
    cytoplasmic linker associated protein 2provided by VGNC
    Primary source
    VGNC:VGNC:27390
    See related
    BGD:BT15998; Ensembl:ENSBTAG00000011333
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CLASP2 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    45
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (7733640..7909236, complement)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene upstream binding protein 1 Neighboring gene uncharacterized LOC132343479 Neighboring gene large ribosomal subunit protein uL22-like Neighboring gene uncharacterized LOC107131651 Neighboring gene programmed cell death 6 interacting protein Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule organizing center IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitotic spindle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CLIP-associating protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191201.3 → NP_001178130.2  CLIP-associating protein 2

      Status: VALIDATED

      Source sequence(s)
      DV884551, DV930237, EH375910, NKLS02000022
      UniProtKB/TrEMBL
      A0AAA9SFG5
      Conserved Domains (3) summary
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:327 → 538
      CLASP_N; CLASP N terminal
      sd00044
      Location:131 → 157
      HEAT; HEAT repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      7733640..7909236 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059879719.1 → XP_059735702.1  CLIP-associating protein 2 isoform X21

      UniProtKB/TrEMBL
      A0AAA9SFG5
      Related
      ENSBTAP00000088127.1, ENSBTAT00000114316.1

    2. XM_059879716.1 → XP_059735699.1  CLIP-associating protein 2 isoform X17

      UniProtKB/TrEMBL
      A0AAA9SFG5
      Related
      ENSBTAP00000081200.1, ENSBTAT00000095192.1

    3. XM_059879729.1 → XP_059735712.1  CLIP-associating protein 2 isoform X34

      UniProtKB/TrEMBL
      A0AAA9S6I3

    4. XM_059879728.1 → XP_059735711.1  CLIP-associating protein 2 isoform X33

      UniProtKB/TrEMBL
      A0AAA9SFG5
      Related
      ENSBTAP00000099547.1, ENSBTAT00000124954.1

    5. XM_059879706.1 → XP_059735689.1  CLIP-associating protein 2 isoform X4

      UniProtKB/TrEMBL
      A0AAA9SFG5

    6. XM_059879721.1 → XP_059735704.1  CLIP-associating protein 2 isoform X23

      UniProtKB/TrEMBL
      A0AAA9S6I3

    7. XM_059879718.1 → XP_059735701.1  CLIP-associating protein 2 isoform X20

      UniProtKB/TrEMBL
      A0AAA9S6I3

    8. XM_024982784.2 → XP_024838552.1  CLIP-associating protein 2 isoform X18

      UniProtKB/TrEMBL
      A0AAA9SFG5
      Conserved Domains (3) summary
      sd00044
      Location:131 → 157
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:327 → 538
      CLASP_N; CLASP N terminal

    9. XM_059879712.1 → XP_059735695.1  CLIP-associating protein 2 isoform X12

      UniProtKB/TrEMBL
      A0AAA9SFG5

    10. XM_059879715.1 → XP_059735698.1  CLIP-associating protein 2 isoform X16

      UniProtKB/TrEMBL
      A0AAA9SFG5

    11. XM_059879711.1 → XP_059735694.1  CLIP-associating protein 2 isoform X10

      UniProtKB/TrEMBL
      A0AAA9SFG5

    12. XM_024982779.2 → XP_024838547.1  CLIP-associating protein 2 isoform X11

      UniProtKB/TrEMBL
      A0AAA9SFG5
      Conserved Domains (4) summary
      sd00044
      Location:131 → 157
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:327 → 538
      CLASP_N; CLASP N terminal
      cl28033
      Location:572 → 806
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    13. XM_059879707.1 → XP_059735690.1  CLIP-associating protein 2 isoform X5

      UniProtKB/TrEMBL
      A0AAA9SFG5

    14. XM_059879709.1 → XP_059735692.1  CLIP-associating protein 2 isoform X8

      UniProtKB/TrEMBL
      A0AAA9SFG5

    15. XM_059879705.1 → XP_059735688.1  CLIP-associating protein 2 isoform X3

      UniProtKB/TrEMBL
      A0AAA9SFG5

    16. XM_059879720.1 → XP_059735703.1  CLIP-associating protein 2 isoform X22

      UniProtKB/TrEMBL
      A0AAA9S6I3

    17. XM_059879717.1 → XP_059735700.1  CLIP-associating protein 2 isoform X19

      UniProtKB/TrEMBL
      A0AAA9S6I3

    18. XM_059879714.1 → XP_059735697.1  CLIP-associating protein 2 isoform X15

      UniProtKB/TrEMBL
      A0AAA9SFG5

    19. XM_059879710.1 → XP_059735693.1  CLIP-associating protein 2 isoform X9

      UniProtKB/TrEMBL
      A0AAA9SFG5

    20. XM_024982780.2 → XP_024838548.1  CLIP-associating protein 2 isoform X13

      UniProtKB/TrEMBL
      A0AAA9SFG5
      Conserved Domains (4) summary
      sd00044
      Location:131 → 157
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:327 → 538
      CLASP_N; CLASP N terminal
      cl28033
      Location:572 → 794
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    21. XM_059879708.1 → XP_059735691.1  CLIP-associating protein 2 isoform X7

      UniProtKB/TrEMBL
      A0AAA9SFG5

    22. XM_059879704.1 → XP_059735687.1  CLIP-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9SFG5

    23. XM_024982772.2 → XP_024838540.1  CLIP-associating protein 2 isoform X6

      UniProtKB/TrEMBL
      A0AAA9SFG5
      Conserved Domains (3) summary
      sd00044
      Location:131 → 157
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:327 → 538
      CLASP_N; CLASP N terminal

    24. XM_059879713.1 → XP_059735696.1  CLIP-associating protein 2 isoform X14

      UniProtKB/TrEMBL
      E1BQ15

    25. XM_024982766.2 → XP_024838534.1  CLIP-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SFG5
      Conserved Domains (3) summary
      sd00044
      Location:131 → 157
      HEAT; HEAT repeat [structural motif]
      pfam02985
      Location:168 → 198
      HEAT; HEAT repeat
      pfam12348
      Location:327 → 538
      CLASP_N; CLASP N terminal

    26. XM_059879723.1 → XP_059735706.1  CLIP-associating protein 2 isoform X25

      UniProtKB/TrEMBL
      A0AAA9SAR2
      Related
      ENSBTAP00000079255.1, ENSBTAT00000090126.1

    27. XM_024982798.2 → XP_024838566.1  CLIP-associating protein 2 isoform X32

      UniProtKB/TrEMBL
      A0AAA9SGX9
      Conserved Domains (2) summary
      sd00044
      Location:640 → 667
      HEAT; HEAT repeat [structural motif]
      pfam12348
      Location:100 → 311
      CLASP_N; CLASP N terminal

    28. XM_024982796.2 → XP_024838564.1  CLIP-associating protein 2 isoform X31

      UniProtKB/TrEMBL
      A0AAA9SGX9
      Conserved Domains (2) summary
      sd00044
      Location:648 → 675
      HEAT; HEAT repeat [structural motif]
      pfam12348
      Location:100 → 311
      CLASP_N; CLASP N terminal

    29. XM_059879726.1 → XP_059735709.1  CLIP-associating protein 2 isoform X28

      UniProtKB/TrEMBL
      A0AAA9SGX9

    30. XM_059879727.1 → XP_059735710.1  CLIP-associating protein 2 isoform X29

      UniProtKB/TrEMBL
      A0AAA9SAR2

    31. XM_059879725.1 → XP_059735708.1  CLIP-associating protein 2 isoform X27

      UniProtKB/TrEMBL
      A0AAA9SAR2

    32. XM_059879724.1 → XP_059735707.1  CLIP-associating protein 2 isoform X26

      UniProtKB/TrEMBL
      A0AAA9SAR2

    33. XM_059879731.1 → XP_059735714.1  CLIP-associating protein 2 isoform X36

      UniProtKB/TrEMBL
      A0AAA9SGX9

    34. XM_024982807.2 → XP_024838575.1  CLIP-associating protein 2 isoform X30

      UniProtKB/TrEMBL
      A0AAA9SGX9
      Related
      ENSBTAP00000083156.1, ENSBTAT00000115053.1
      Conserved Domains (3) summary
      sd00044
      Location:657 → 684
      HEAT; HEAT repeat [structural motif]
      pfam12348
      Location:100 → 311
      CLASP_N; CLASP N terminal
      cl28033
      Location:345 → 560
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    35. XM_059879730.1 → XP_059735713.1  CLIP-associating protein 2 isoform X35

      UniProtKB/TrEMBL
      A0AAA9SGX9

    36. XM_059879722.1 → XP_059735705.1  CLIP-associating protein 2 isoform X24

      UniProtKB/TrEMBL
      A0AAA9SGX9
    Nucleotide Protein Strain
    Heading Accession and Version

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