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    LNX2 ligand of numb-protein X 2 [ Bos taurus (cattle) ]

    Gene ID: 526424, updated on 5-Mar-2024

    Summary

    Official Symbol
    LNX2provided by VGNC
    Official Full Name
    ligand of numb-protein X 2provided by VGNC
    Primary source
    VGNC:VGNC:30946
    See related
    BGD:BT14855; Ensembl:ENSBTAG00000015614
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See LNX2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (32322916..32412540)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene GS homeobox 1 Neighboring gene RNA polymerase I and III subunit D Neighboring gene mitochondrial translational initiation factor 3 Neighboring gene general transcription factor IIIA Neighboring gene uncharacterized LOC104973577

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075884.1NP_001069352.1  ligand of Numb protein X 2

      See identical proteins and their annotated locations for NP_001069352.1

      Status: PROVISIONAL

      Source sequence(s)
      BC119977
      UniProtKB/TrEMBL
      Q0VCV5
      Related
      ENSBTAP00000020741.4, ENSBTAT00000020741.5
      Conserved Domains (3) summary
      smart00228
      Location:223309
      PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
      cd00992
      Location:591675
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam00097
      Location:5086
      zf-C3HC4; Zinc finger, C3HC4 type (RING finger)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      32322916..32412540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892055.1XP_059748038.1  ligand of Numb protein X 2 isoform X1