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    SCYL3 SCY1 like pseudokinase 3 [ Bos taurus (cattle) ]

    Gene ID: 506600, updated on 6-Jun-2024

    Summary

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    Official Symbol
    SCYL3provided by VGNC
    Official Full Name
    SCY1 like pseudokinase 3provided by VGNC
    Primary source
    VGNC:VGNC:34376
    See related
    BGD:BT14617; Ensembl:ENSBTAG00000014794
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SCYL3 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (37492619..37534240, complement)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132342461 Neighboring gene chromosome 16 C1orf112 homolog Neighboring gene methyltransferase like 18 Neighboring gene 5S ribosomal RNA Neighboring gene kinesin associated protein 3 Neighboring gene U6 spliceosomal RNA Neighboring gene N-terminal Xaa-Pro-Lys N-methyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC137795

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein-associating with the carboxyl-terminal domain of ezrin
    Names
    SCY1-like 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075273.2 → NP_001068741.2  protein-associating with the carboxyl-terminal domain of ezrin

      See identical proteins and their annotated locations for NP_001068741.2

      Status: VALIDATED

      Source sequence(s)
      AM028401, BC118112, DV877162, EE371208, NKLS02000016
      UniProtKB/TrEMBL
      A0AAA9T4G3
      Related
      ENSBTAP00000019684.6, ENSBTAT00000019684.6
      Conserved Domains (3) summary
      pfam00069
      Location:26 → 245
      Pkinase; Protein kinase domain
      sd00044
      Location:337 → 367
      HEAT; HEAT repeat [structural motif]
      cl21453
      Location:9 → 247
      PKc_like; Protein Kinases, catalytic domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37492619..37534240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005216892.3 → XP_005216949.2  protein-associating with the carboxyl-terminal domain of ezrin isoform X1

      UniProtKB/TrEMBL
      A0AAA9T4G3, A0AAF6DMC6
      Conserved Domains (1) summary
      cl21453
      Location:9 → 247
      PKc_like; Protein Kinases, catalytic domain

    2. XM_059875298.1 → XP_059731281.1  protein-associating with the carboxyl-terminal domain of ezrin isoform X1

      UniProtKB/TrEMBL
      A0AAA9T4G3, A0AAF6DMC6

    3. XM_010813210.4 → XP_010811512.2  protein-associating with the carboxyl-terminal domain of ezrin isoform X2

      Conserved Domains (1) summary
      cl21453
      Location:1 → 105
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein Strain
    Heading Accession and Version

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