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    SNRPB2 small nuclear ribonucleoprotein polypeptide B2 [ Bos taurus (cattle) ]

    Gene ID: 767873, updated on 6-Jun-2024

    Summary

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    Official Symbol
    SNRPB2provided by VGNC
    Official Full Name
    small nuclear ribonucleoprotein polypeptide B2provided by VGNC
    Primary source
    VGNC:VGNC:35077
    See related
    BGD:BT25617; Ensembl:ENSBTAG00000027506
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SNRPB2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (10562627..10576213)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 16B Neighboring gene Krueppel-like factor 4 Neighboring gene phosphoribosylaminoimidazole carboxylase pseudogene Neighboring gene otoraplin Neighboring gene ninein-like protein Neighboring gene N-acetylneuraminic acid phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables U1 snRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    U2 small nuclear ribonucleoprotein B''
    Names
    small nuclear ribonucleoprotein polypeptide B''

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192552.1 → NP_001179481.1  U2 small nuclear ribonucleoprotein B''

      See identical proteins and their annotated locations for NP_001179481.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000013
      Conserved Domains (3) summary
      COG0724
      Location:1 → 179
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12478
      Location:6 → 96
      RRM1_U2B; RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins
      cd12481
      Location:139 → 218
      RRM2_U2B; RNA recognition motif 2 found in vertebrate U2 small nuclear ribonucleoprotein B" (U2B")

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      10562627..10576213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015473489.3 → XP_015328975.1  U2 small nuclear ribonucleoprotein B'' isoform X1

      UniProtKB/TrEMBL
      G5E5Y0
      Conserved Domains (2) summary
      cd12481
      Location:146 → 225
      RRM2_U2B; RNA recognition motif 2 (RRM2) found in vertebrate U2 small nuclear ribonucleoprotein B" (U2B")
      cd12478
      Location:6 → 96
      RRM1_U2B; RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins

    2. XM_005200943.5 → XP_005201000.1  U2 small nuclear ribonucleoprotein B'' isoform X1

      See identical proteins and their annotated locations for XP_005201000.1

      UniProtKB/TrEMBL
      G5E5Y0
      Related
      ENSBTAP00000039319.4, ENSBTAT00000039526.5
      Conserved Domains (2) summary
      cd12481
      Location:146 → 225
      RRM2_U2B; RNA recognition motif 2 (RRM2) found in vertebrate U2 small nuclear ribonucleoprotein B" (U2B")
      cd12478
      Location:6 → 96
      RRM1_U2B; RNA recognition motif 1 in U2 small nuclear ribonucleoprotein B" (U2B") and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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