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    srsx-25 G-protein coupled receptors family 1 profile domain-containing protein;Serpentine Receptor, class SX [ Caenorhabditis elegans ]

    Gene ID: 190453, updated on 12-Jun-2024

    Summary

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    Gene symbol
    srsx-25
    Gene description
    G-protein coupled receptors family 1 profile domain-containing protein;Serpentine Receptor, class SX
    Locus tag
    CELE_Y62E10A.4
    See related
    AllianceGenome:WB:WBGene00013375
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See srsx-25 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (13365169..13368435)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Major sperm protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Methylated-DNA--protein-cysteine methyltransferase Neighboring gene Large ribosomal subunit protein P2 Neighboring gene Ribonuclease P protein subunit p20 Neighboring gene Protein kish

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    G-protein coupled receptors family 1 profile domain-containing protein;Serpentine Receptor, class SX
    NP_001255732.1
    • Partially confirmed by transcript evidence
    NP_001255733.1
    • Product from WormBase gene class srsx;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      13365169..13368435
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268803.2 → NP_001255732.1  G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255732.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U1X1
      Conserved Domains (2) summary
      pfam10320
      Location:20 → 282
      7TM_GPCR_Srsx; Serpentine type 7TM GPCR chemoreceptor Srsx
      cd00637
      Location:45 → 67
      7tm_classA_rhodopsin-like; TM helix 2 [structural motif]

    2. NM_001268804.3 → NP_001255733.1  Serpentine Receptor, class SX [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255733.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3NQB7
      Conserved Domains (1) summary
      cl21561
      Location:1 → 79
      7tm_4; Olfactory receptor
    Nucleotide Protein
    Heading Accession and Version

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