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    T12G3.4 Strictosidine synthase conserved region domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178141, updated on 12-Jun-2024

    Summary

    Gene symbol
    T12G3.4
    Gene description
    Strictosidine synthase conserved region domain-containing protein
    Locus tag
    CELE_T12G3.4
    See related
    AllianceGenome:WB:WBGene00011739
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable strictosidine synthase activity. Predicted to be involved in biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human APMAP (adipocyte plasma membrane associated protein). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See T12G3.4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (12048256..12049928)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CULLIN_2 domain-containing protein;Protein kinase domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Beta-1,3-galactosyltransferase bre-5;Hexosyltransferase Neighboring gene Transcription elongation factor SPT5 Neighboring gene Glycolipid transfer protein domain-containing protein Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables strictosidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Strictosidine synthase conserved region domain-containing protein
    NP_502282.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12048256..12049928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069881.9NP_502282.1  Strictosidine synthase conserved region domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502282.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22437
      Conserved Domains (2) summary
      COG3386
      Location:112349
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:224315
      Str_synth; Strictosidine synthase