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    LOC101927297 uncharacterized LOC101927297 [ Homo sapiens (human) ]

    Gene ID: 101927297, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC101927297
    Gene description
    uncharacterized LOC101927297
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in duodenum (RPKM 1.1), colon (RPKM 1.0) and 9 other tissues See more
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    Genomic context

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    See LOC101927297 in Genome Data Viewer
    Location:
    4q13.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (70678658..70686816)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (74021125..74029284)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene enamelin Neighboring gene joining chain of multimeric IgA and IgM Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:71553174-71554144 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:71554145-71555113 Neighboring gene UTP3 small subunit processome component Neighboring gene RNA, U6 small nuclear 520, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      70678658..70686816
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_938860.3 RNA Sequence

    2. XR_938863.3 RNA Sequence

    3. XR_245251.4 RNA Sequence

    4. XR_938861.2 RNA Sequence

    5. XR_938862.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      74021125..74029284
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007074682.1 RNA Sequence

    2. XR_007074686.1 RNA Sequence

    3. XR_007074683.1 RNA Sequence

    4. XR_007074684.1 RNA Sequence

    5. XR_007074685.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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