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    rufy1 RUN and FYVE domain containing 1 [ Polypterus senegalus (gray bichir) ]

    Gene ID: 120542431, updated on 8-May-2024

    Summary

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    Gene symbol
    rufy1
    Gene description
    RUN and FYVE domain containing 1
    Locus tag
    GTO96_0007622
    See related
    EnsemblRapid:ENSSTSG00000014923
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polypterus senegalus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Polypterus
    Orthologs
    human zebrafish all
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    Genomic context

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    See rufy1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current ASM1683550v1 (GCF_016835505.1) 13 NC_053166.1 (121473364..121545552)

    Chromosome 13 - NC_053166.1Genomic Context describing neighboring genes Neighboring gene prefoldin subunit 1 Neighboring gene proheparin-binding EGF-like growth factor Neighboring gene deoxycytidine kinase 2-like Neighboring gene heterogeneous nuclear ribonucleoprotein H1, like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053166.1 Chromosome 13 Reference ASM1683550v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RUN and FYVE domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Polypterus senegalus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1683550v1 Primary Assembly

    Genomic

    1. NC_053166.1 Reference ASM1683550v1 Primary Assembly

      Range
      121473364..121545552
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039774910.1 → XP_039630844.1  RUN and FYVE domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8X7WU23
      Related
      ENSSTSP00000035878.1, ENSSTST00000040349.1
      Conserved Domains (3) summary
      smart00593
      Location:201 → 263
      RUN; domain involved in Ras-like GTPase signaling
      COG1196
      Location:336 → 631
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15758
      Location:628 → 698
      FYVE_RUFY1; FYVE domain found in RUN and FYVE domain-containing protein 1 (RUFY1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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