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    EXOC6 exocyst complex component 6 [ Gallus gallus (chicken) ]

    Gene ID: 423807, updated on 3-Apr-2024

    Summary

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    Symbol
    EXOC6provided by CGNC
    Full Name
    exocyst complex component 6provided by CGNC
    Primary source
    CGNC:52056
    See related
    Ensembl:ENSGALG00010017859
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SEC15L1
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (21370117..21456864, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (21261447..21348151, complement)

    Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121111226 Neighboring gene cytochrome P450 family 26 subfamily A member 1 Neighboring gene cytochrome P450 family 26 subfamily C member 1 Neighboring gene uncharacterized LOC107053706 Neighboring gene hematopoietically expressed homeobox

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle tethering involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exocyst complex component 6
    Names
    SEC15-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012905.2 → NP_001012923.1  exocyst complex component 6 isoform 2

      See identical proteins and their annotated locations for NP_001012923.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000232
      UniProtKB/TrEMBL
      A0A1D5PR36, A0A8V0YX44, Q5ZJ05
      Related
      ENSGALP00010025653.1, ENSGALT00010043186.1
      Conserved Domains (1) summary
      pfam04091
      Location:409 → 715
      Sec15; Exocyst complex subunit Sec15-like

    2. NM_001397264.1 → NP_001384193.1  exocyst complex component 6 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000232
      UniProtKB/TrEMBL
      A0A8V0YX44, A0A8V0YX53
      Related
      ENSGALP00010025663.1, ENSGALT00010043198.1
      Conserved Domains (1) summary
      pfam04091
      Location:450 → 756
      Sec15; Exocyst complex subunit Sec15-like

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      21370117..21456864 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015288612.4 → XP_015144098.1  exocyst complex component 6 isoform X5

      UniProtKB/TrEMBL
      A0A8V0YX44
      Conserved Domains (1) summary
      pfam04091
      Location:463 → 769
      Sec15; Exocyst complex subunit Sec15-like

    2. XM_015288609.4 → XP_015144095.1  exocyst complex component 6 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YX44, A0A8V0ZB11
      Related
      ENSGALP00010025674.1, ENSGALT00010043215.1
      Conserved Domains (1) summary
      pfam04091
      Location:463 → 769
      Sec15; Exocyst complex subunit Sec15-like

    3. XM_015288608.4 → XP_015144094.1  exocyst complex component 6 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YX44, A0A8V0Z436
      Related
      ENSGALP00010025687.1, ENSGALT00010043234.1
      Conserved Domains (1) summary
      pfam04091
      Location:463 → 779
      Sec15; Exocyst complex subunit Sec15-like

    4. XM_025151597.3 → XP_025007365.1  exocyst complex component 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YX44, A0A8V0Z432
      Related
      ENSGALP00010025682.1, ENSGALT00010043226.1
      Conserved Domains (1) summary
      pfam04091
      Location:463 → 779
      Sec15; Exocyst complex subunit Sec15-like

    5. XM_015288614.4 → XP_015144100.1  exocyst complex component 6 isoform X7

      UniProtKB/TrEMBL
      A0A8V0YX44
      Conserved Domains (1) summary
      pfam04091
      Location:409 → 725
      Sec15; Exocyst complex subunit Sec15-like

    6. XM_040702420.2 → XP_040558354.1  exocyst complex component 6 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YX44
      Related
      ENSGALP00010025647.1, ENSGALT00010043179.1

    7. XM_015288611.4 → XP_015144097.1  exocyst complex component 6 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YX44
      Related
      ENSGALP00010025658.1, ENSGALT00010043191.1
      Conserved Domains (1) summary
      pfam04091
      Location:450 → 766
      Sec15; Exocyst complex subunit Sec15-like

    8. XM_015288616.4 → XP_015144102.1  exocyst complex component 6 isoform X8

      UniProtKB/TrEMBL
      A0A8V0ZB06
      Conserved Domains (1) summary
      pfam04091
      Location:463 → 659
      Sec15; Exocyst complex subunit Sec15-like

    RNA

    1. XR_001467181.4 RNA Sequence

    2. XR_005860624.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      21261447..21348151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046920275.1 → XP_046776231.1  exocyst complex component 6 isoform X5

    2. XM_046920273.1 → XP_046776229.1  exocyst complex component 6 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZB11

    3. XM_046920272.1 → XP_046776228.1  exocyst complex component 6 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z436

    4. XM_046920271.1 → XP_046776227.1  exocyst complex component 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z432

    5. XM_046920277.1 → XP_046776233.1  exocyst complex component 6 isoform X7

    6. XM_046920276.1 → XP_046776232.1  exocyst complex component 6 isoform X6

    7. XM_046920274.1 → XP_046776230.1  exocyst complex component 6 isoform X4

    8. XM_046920278.1 → XP_046776234.1  exocyst complex component 6 isoform X8

    RNA

    1. XR_006935010.1 RNA Sequence

    2. XR_006935011.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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