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    LOC5507996 endoribonuclease Dicer [ Nematostella vectensis (starlet sea anemone) ]

    Gene ID: 5507996, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC5507996
    Gene description
    endoribonuclease Dicer
    Locus tag
    NEMVEDRAFT_v1g119416
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nematostella vectensis
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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    Genomic context

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    See LOC5507996 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current jaNemVect1.1 (GCF_932526225.1) 7 NC_064040.1 (2884109..2896661)
    100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834253.1 (145490..158026, complement)

    Chromosome 7 - NC_064040.1Genomic Context describing neighboring genes Neighboring gene alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene galanin receptor 2a Neighboring gene proteasome subunit alpha type-3 Neighboring gene adhesion G protein-coupled receptor E2-like Neighboring gene glycine-rich cell wall structural protein 1.8-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple dicer genes in the early-diverging metazoa. de Jong D, et al. Mol Biol Evol, 2009 Jun. PMID 19276153
    2. The evolution of microRNA pathway protein components in Cnidaria. Moran Y, et al. Mol Biol Evol, 2013 Dec. PMID 24030553, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables deoxyribonuclease I activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonuclease III activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in apoptotic DNA fragmentation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pre-miRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in siRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RISC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endoribonuclease Dicer
    Names
    dicer 2
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference jaNemVect1.1

    Genomic

    1. NC_064040.1 Reference jaNemVect1.1

      Range
      2884109..2896661
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032376733.2 → XP_032232624.2  endoribonuclease Dicer

    Nucleotide Protein
    Heading Accession and Version

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